[Biojava-dev] maven progress

[Andreas Prlic]

>> The new SVN location is emerging here:
>>
>> http://dev.open-bio.org/home/svn-repositories/biojava/biojava-live/biojava
>
> That seems like an odd place for it, at the same level as branches, tags,
> and trunk?
>
> If you've branched for 1.7 and called for the freeze on trunk, I don't see
> any reason not to do this work on trunk.

ok. makes sense.  It is easy to flip locations around in svn..  I can
move the old trunk  e.g. to a tag folder for archive purposes and make
what is called biojava right now the future trunk. (in svn this moves
or copy operations are cheap)  For the moment things are not
stabilized yet and I will do this once things are there...

At the moment I am chasing an "interesting" problem. When I run the
junit tests on the new core module in eclipse, they run fine.   When I
do the same via a mvn test I get several issues like the one below.
Anybody got an idea?

-------------------------------------------------------------------------------
Test set: org.biojava.bio.seq.project.ProjectedFeatureHolderTest
-------------------------------------------------------------------------------
Tests run: 6, Failures: 0, Errors: 1, Skipped: 0, Time elapsed: 0.036
sec <<< FAILURE!
testFeatureChangeEvent(org.biojava.bio.seq.project.ProjectedFeatureHolderTest)
 Time elapsed: 0.011 sec  <<< ERROR!
java.lang.AssertionError: firePreChangeEvent must be called in a
synchronized block locking the ChangeSupport
	at org.biojava.utils.ChangeSupport.firePreChangeEvent(ChangeSupport.java:281)
	at org.biojava.bio.seq.projection.ReparentContext$PFChangeForwarder.preChange(ReparentContext.java:299)
	at org.biojava.utils.ChangeSupport.firePreChangeEvent(ChangeSupport.java:297)
	at org.biojava.bio.seq.impl.SimpleFeature.setLocation(SimpleFeature.java:173)
	at org.biojava.bio.seq.project.ProjectedFeatureHolderTest.testFeatureChangeEvent(ProjectedFeatureHolderTest.java:297)

Andreas