[Biojava-dev] help (F1 F1) regarding biojava

[pranav waila]

package org.biojava.bio.seq.db;

import org.biojava.bio.seq.*;
import org.biojava.bio.seq.io.*;
import org.biojava.bio.*;
import org.biojava.bio.seq.db.*;
import org.biojava.bio.seq.io.*;
import java.net.*;
class test{
    public static SequenceFormat sf;

    public static void main(String args[]){

        System.getProperties().put("proxySet","true");

        System.getProperties().put("proxyPort","3128");
        System.getProperties().put("proxyHost","172.16.0.6");

        Sequence s;
        sf=new FastaFormat();
        //sf=new GenbankXmlFormat();
                NCBISequenceDB ncbi = new NCBISequenceDB(
NCBISequenceDB.DB_PROTEIN,sf);//new FastaFormat());
//        GenbankSequenceDB gdb=new GenbankSequenceDB();
        //ncbi.setSequenceFormat(FASTA);
    try{



//        Sequence sequenceFromGenbank = ncbi.getSequence("P10659");
//        System.out.println(sequenceFromGenbank.getName());

// older code
        s=ncbi.getSequence("P10659");

        //s=gdb.getAddress();//getSequence("P10659");//3789789");
        System.out.print("check");
        System.out.println(ncbi.getSequence("190786"));

//
    }
    catch(Exception e){
        e.printStackTrace();
        //System.out.println("protien name is : zinteminia");
    }

    }
}


This is my code for fetching the sequence from NCBI but it is giving somany
exceptions. can u provide me some code to do so..

the errors are as follows :

Bio java exception could not read sequence

CAN U PLEASE HELP ME.

waiting for reply

PRANAV WAILA