[Biojava-dev] [Bug 2400] New: add parsing of SSBOND records in PDB files

bugzilla-daemon at portal.open-bio.org bugzilla-daemon at portal.open-bio.org
Wed Nov 14 16:20:01 UTC 2007


http://bugzilla.open-bio.org/show_bug.cgi?id=2400

           Summary: add parsing of SSBOND records in PDB files
           Product: BioJava
           Version: unspecified
          Platform: PC
        OS/Version: Linux
            Status: NEW
          Severity: enhancement
          Priority: P2
         Component: structure
        AssignedTo: biojava-dev at biojava.org
        ReportedBy: bmduggan at yahoo.com


I would like to be able to use BioJava to pass the SSBOND records in the header
of a PDB file.  Currently these lines are not parsed.  The information I would
like to obtain would be a list of the pairs of residues involved in each
disulfide bond in the structure.  Each residue would probably have to be
identified by residue number and chain.


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