[Biojava-dev] Problem with Phylo Code in CVS

[Mark Schreiber]

Hi =

CVS is currently unbuildable because of recent commits of phylo code.
There are two problems.

1) The code has a reliance on JGraphT. This needs to be commited in
the appropriate place and added to the classpath etc in the ant build
file.

2) The code contains java 1.5 reliant code (generics) that won't
compile with the biojava standard JDK (1.4.2). This is not really an
issue as I am about to do a final BioJava 1.5 build after which we
switch to JDK1.5 (or maybe even 1.6).

Can someone checkin JGraphT and make the appropriate changes to the
build XML? Please also ensure the licenses are acceptable and properly
replicated.

- Mark