[Biojava-dev] Possible bug in AbstractRichSequenceDB

[Mark Schreiber]

Sorry, seems this was a false alarm. The bug was somewhere else in my
code, not in the iterator.

- Mark

On Dec 11, 2007 12:56 AM, Richard Holland <holland at ebi.ac.uk> wrote:
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> Do you have a sample bit of code to demonstrate the problem?
>
>
>
>
> Mark Schreiber wrote:
> > Hi -
> >
> > Yesterday I noticed a possible bug in HashRichSequenceDB which is
> > probably caused by AbstractRichSequenceDB.  The issue is that the
> > iterator thinks there are no sequences even when there are.
> >
> > I don't have the code base with me but probably when sequences are
> > added without an ID no ID is being generated for them and thus the set
> > of ID's is empty even though there are sequences present in the DB.
> >
> > PS, would have submitted this to bugzilla but the biojava.org seems to be down.
> >
> > - Mark
>
> > _______________________________________________
> > biojava-dev mailing list
> > biojava-dev at lists.open-bio.org
> > http://lists.open-bio.org/mailman/listinfo/biojava-dev
> >
>
> - --
> Richard Holland (BioMart)
> EMBL EBI, Wellcome Trust Genome Campus,
> Hinxton, Cambridgeshire CB10 1SD, UK
> Tel. +44 (0)1223 494416
>
> http://www.biomart.org/
> http://www.biojava.org/
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