[Biojava-dev] [biojava-builder] BioJava nightly build report

autobuilder at derkholm.net autobuilder at derkholm.net
Sat May 8 00:09:37 EDT 2004


BioJava automatic build system, run 20040508

Binary build: FAILED!
Javadocs build: OK
Core test suite: NOT RUN

Problems occurred during this build cycle -- please investigate as soon as possible!

The following files were modified in the last 24 hours:

  * biojava-live/src/org/biojava/bio/dp/twohead/DPCompiler.java
  * biojava-live/src/org/biojava/bio/gui/sequence/SequencePanel.java
  * biojava-live/src/org/biojava/bio/program/das/dasstructure/DASStructureCall.java
  * biojava-live/src/org/biojava/bio/program/das/dasstructure/DASStructureXMLResponseParser.java
  * biojava-live/src/org/biojava/bio/program/formats/FormatTools.java
  * biojava-live/src/org/biojava/bio/program/sax/blastxml/BlastXMLParserFacade.java
  * biojava-live/src/org/biojava/bio/program/unigene/SQLUnigeneFactory.java
  * biojava-live/src/org/biojava/bio/proteomics/ProteaseManager.java
  * biojava-live/src/org/biojava/bio/seq/ProteinTools.java
  * biojava-live/src/org/biojava/bio/seq/RNATools.java
  * biojava-live/src/org/biojava/bio/seq/impl/LazyFilterFeatureHolder.java
  * biojava-live/src/org/biojava/bio/seq/io/AbstractGenEmblFileFormer.java
  * biojava-live/src/org/biojava/bio/seq/io/filterxml/XMLAnnotationTypeHandler.java
  * biojava-live/src/org/biojava/bio/seq/io/filterxml/XMLFilterHandler.java
  * biojava-live/src/org/biojava/bio/seq/projection/ProjectionEngine.java
  * biojava-live/src/org/biojava/bio/structure/io/DASStructureClient.java
  * biojava-live/src/org/biojava/bio/symbol/AlphabetManager.java
  * biojava-live/src/org/biojava/bio/symbol/CodonPrefTools.java
  * biojava-live/src/org/biojava/directory/Registry.java
  * biojava-live/src/org/biojava/naming/ObdaInitialContextFactory.java
  * biojava-live/src/org/biojava/ontology/OntoTools.java
  * biojava-live/src/org/biojava/ontology/expression/ReasoningTools.java
  * biojava-live/src/org/biojava/utils/Services.java
  * biojava-live/src/org/biojava/utils/regex/Matcher.java
  * biojava-live/src/org/biojava/utils/regex/PatternChecker.java
  * biojava-live/src/org/biojava/utils/walker/WalkerFactory.java
  * biojava-live/src/org/biojava/utils/xml/ResourceEntityResolver.java

A patch file reflecting these changes is available from

      http://www.derkholm.net/autobuild/patches/

-- 
BioJava Autobuilder, maintained by Thomas Down
If you notice any problems, contact autobuilder at derkholm.net



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