[Biojava-dev] Re: biosql

Thomas Down td2 at sanger.ac.uk
Mon Mar 15 11:22:38 EST 2004


On 15 Mar 2004, at 15:41, Matthew Pocock wrote:

> Scratch that - a clean rebuild seems to have fixed it. I am getting a  
> single failure though:
>
> Testcase: testFeaturePersistence took 0.843 sec
>    FAILED
> [feature] location is now an instance of:  
> org.biojava.bio.symbol.RangeLocation
> junit.framework.AssertionFailedError: [feature] location is now an  
> instance of: org.biojava.bio.symbol.RangeLocation
>    at  
> org.biojava.bio.seq.db.biosql.BioSQLSequenceDBTest.testFeaturePersisten 
> ce(BioSQLSequenceDBTest.java:236)
>    at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
>    at  
> sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.ja 
> va:39)
>    at  
> sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccesso 
> rImpl.java:25)
>
> Thomas - is this test beeing run by the nightlies?

No it isn't -- I've been waiting for this failure to be fixed before  
turning on the database-dependent tests.  Trouble is, we don't make a  
nightly release if *any* tests fail, and this one has been hanging  
around for a while...

      Thomas.



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