[Biojava-dev] Probabilistic Suffix Trees vs. Suffix Trees - Are PST needed in BIOJava?

Matthew Pocock matthew_pocock at yahoo.co.uk
Tue Jul 20 07:30:11 EDT 2004


Hi Eivind,

Sounds great. Do you have a reference or something describing PST in 
more detail?

Matthew

Eivind Naess wrote:

>Hi guys, 
>
>I have an implementation of a probabilistic suffix
>tree (PST) in Java that might be usefull for statistic
>measurements of biometric strings as well as other
>pattern recognizing applications. 
>
>Now, I do not know the differences in full between PST
>and a Suffix Tree (ST) which is already implemented in
>BioJava. Please, if someone could reply me back with
>some thoughts about this and how I would proceed
>further to eventually contribute some time onto this
>project.
>
>Best regards, 
>Eivind Naess
>
>
>		
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