[Biojava-dev] sorry

[Keith James]

>>>>> "Matthew" == Matthew Pocock <matthew_pocock at yahoo.co.uk> writes:

    Matthew> Hi, I've checked in the initial ontology reasoning
    Matthew> code. It doesn't work, but it also doesn't blow up.

    Matthew> It's more than likely that this commit has done bad
    Matthew> things to cvs & the build process. Can people help sort
    Matthew> this out? Symptoms would be great.

Mate, you've forgotten to check in org.biojava.ontology.format.*
cvs update -dP only gives me an io subdir under ontology:

compile-biojava:
    [javac] Compiling 1099 source files to /hgs2/team65/kdj/dev/biojava-live/ant-build/classes/biojava
    [javac] depend attribute is not supported by the modern compiler
    [javac] /hgs2/team65/kdj/dev/biojava-live/ant-build/src/biojava/org/biojava/ontology/io/TriplesParser.java:9: package org.biojava.ontology.format.triples.lexer does not exist
    [javac] import org.biojava.ontology.format.triples.lexer.Lexer;
    [javac]                                                  ^
    [javac] /hgs2/team65/kdj/dev/biojava-live/ant-build/src/biojava/org/biojava/ontology/io/TriplesParser.java:10: package org.biojava.ontology.format.triples.lexer does not exist
    [javac] import org.biojava.ontology.format.triples.lexer.LexerException;

-- 

- Keith James <kdj at sanger.ac.uk> Microarray Facility, Team 65 -
- The Wellcome Trust Sanger Institute, Hinxton, Cambridge, UK -