[Biojava-dev] Q: chrom positions returned by EnsJ != website
Jim Eberle
jeberle at p-gene.com
Thu Mar 27 09:08:04 EST 2003
The start/end positions I get back from an exon query in EnsJ do not match
the web:
EnsJ
------------
Exon: ENSE00001136516
Map: DEFAULT_ASSEMBLY
Chrom: 17
Strand: -1
Start: 28289613
End: 28289712
Length: 100
Web
------------
Exon: ENSE00001136516
Chrom: 17
Strand: -1
Start: 30442615
End: 30442714
Length: 100
The numbers are off by 2,153,002. Can anyone explain why this is the case?
Does it have to do w/ viewing 2 different maps (DEFAULT_MAP v. MAP 31)?
Thanks,
Jim Eberle
ParAllele BioScience
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