[Biojava-dev] Editable sequences

Schreiber, Mark mark.schreiber at agresearch.co.nz
Tue Jul 29 20:47:36 EDT 2003


Hi -
 
You can edit a SimpleSymbolList using its edit() method. I think most Sequence implementations will not let you do this as it can cause havoc with Features. There are methods in SequenceTools for performing subsequence operations.
 
I am preparing a tutorial on using edits for biojava in anger which should be ready soon. If not bug me about it.
 
- Mark
 

	-----Original Message----- 
	From: daviddebeule at pandora.be [mailto:daviddebeule at pandora.be] 
	Sent: Tue 29/07/2003 7:11 p.m. 
	To: biojava-dev at biojava.org 
	Cc: 
	Subject: [Biojava-dev] Editable sequences
	
	

	Hi,
	
	Is there an easy way to make a SimpleSequence 'Editable' ? I want to add/ remove/insert symbols.  I probably need to make something like a SimpleEditableSequence but I am not sure which methods I can to override to accomplish this.
	
	Thanks in advance,
	
	David
	
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