[Biojava-dev] Re: SequenceDB way too big!!!

[Russell Smithies]

Hi,
To save me some time hunting thru the source, what was the main trick to
reducing memory usage?

thanx
Russell


>    1. Re: SequenceDB way too big!!! (Matthew Pocock)
>
>
> ----------------------------------------------------------------------
>
> Date: Mon, 10 Feb 2003 15:48:52 +0000
> From: Matthew Pocock <matthew_pocock at yahoo.co.uk>
> To: Matthew Pocock <matthew_pocock at yahoo.co.uk>
> Cc: biojava-dev at biojava.org

> We've done some poking, some swearing and David Huen has written some
> code. Before Davids modifications, I had to use -Xmx35mb to load in a 15
> mega base fasta sequence. Now, I need -Xmx5mb to make it run!!! This is
> on Windows 2k with the 1.4.1 VM. The newer shineyer code is in CVS and
> will be part of rc2.
>
> Well done David.