[Biojava-dev] AnnotationForwarder

[Schreiber, Mark]

Would it be a good idea to add a method to Annotatable called
getAnnotationForwarder() as a reminder that the AnnotationForwarder
needs to be implemented?

Obviously this would break lots of stuff so might not be a very
attractive solution.

> -----Original Message-----
> From: Matthew Pocock [mailto:matthew_pocock@yahoo.co.uk] 
> Sent: Friday, 1 November 2002 12:22 p.m.
> To: Schreiber, Mark
> Cc: Biojava-dev@biojava.org
> Subject: Re: [Biojava-dev] AnnotationForwarder
> 
> 
> Hi Mark,
> 
> You are probably not missing anything. It is possible that 
> some of the 
> classes that don't use an annotation forwarder should be. Have fun.
> 
> Matthew
> 
> Schreiber, Mark wrote:
> > Hi -
> > 
> > I am doing some documentation of the Annotation API and I 
> noticed that 
> > the AnnotationForwarder isn't used in a couple of places it 
> possible 
> > should be. A search for the string AnnotationForwarder in 
> the source 
> > tree returns the following classes.
> > 
> >    SimpleFeature.java
> >    AbstractSymbol.java
> >    AbstractSymbolList.java
> >    AbstractTaxon.java
> >    Annotatable.java
> > 
> > However a search of the String implements Annotatable returns,
> > 
> >    DASSequence.java
> >    RawAnnotationSequence.java
> >    SequenceDBSearchHit.java
> >    SequenceDBSearchResult.java
> >    BioSQLAssembly.java
> >    BioSQLChangeHub.java
> >    BioSQLSequence.java
> >    SimpleFeature.java
> >    AgaveWriter.java
> >    SymbolTokenization.java
> >    DummySequence.java
> >    Feature.java
> >    Sequence.java
> >    SimpleAssembly.java
> >    SubSequence.java
> >    AbstractSymbol.java
> >    AbstractSymbolList.java
> >    Alphabet.java
> >    Symbol.java
> >    AbstractTaxon.java
> >    Taxon.java
> >    Annotatable.java
> >    Annotation.java
> > 
> > Some of these will inherit their AnnotationForwarder from their 
> > Abstract classes above but most don't have an annotation 
> forwarder, am 
> > I missing something here?
> > 
> > - Mark
> > 
> > 
> > Mark Schreiber PhD
> > Bioinformatics
> > AgResearch Invermay
> > PO Box 50034
> > Mosgiel
> > New Zealand
> >  
> > PH:   +64 3 489 9175
> > FAX:  +64 3 489 3739
> > 
> > 
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