[Biojava-dev] RE: [Biojava-l] BLAST/Java interface

[Michael L. Heuer]

Just to raise an alternative point of view -- perhaps biojava isn't the
best place for web services and other enterprise-style projects.  Maybe
the Omnigene project (http://omnigene.sourceforge.net) might be a better
fit.  I know Brian is working on developing more analysis web services
to build on their DAS support.

   michael


On Tue, 27 Aug 2002, Patrick McConnell wrote:

>
> OK.  So, what do I need to do to get a read/write account on the CVS?  What
> part of the biojava tree should I build the web services stuff on?
>
> -Patrick
>
>
>
>
>
> "Schreiber, Mark" <mark.schreiber@agresearch.co.nz> on 08/26/2002 05:24:44
> PM
>
> To:    "Patrick McConnell" <MCCon012@mc.duke.edu>
> cc:    <biojava-dev@biojava.org>
>
> Subject:    RE: [Biojava-l] BLAST/Java interface
>
>
> I for one would be very keen to see BioJava be able to connect to both
> public and in-house web services. It seems you have the experience so,
> in the tradition of open-source, if you code it it will be our standard
> :)
>
> - Mark
>
> > If this looks like a promising project, I would like to
> > volunteer my time to help develop web services for BioJava.
> > I have developed many, many web services for internal use
> > here, which would be good candidates for porting to BioJava.
> > Also, I am involved in a project for developing web services
> > to sit atop a grid at the North Carolina Supercomputing
> > Center.  We will also be developing web portals
> > (JSP/servlets) for the web services.  These could also be
> > ported to BioJava.  (For instance, I have developed a JSP
> > script that formats NCBI blast XML to a web page that looks
> > nearly identicle to NCBI's output.)
> >
> > Let me know,
> >
> > -Patrick McConnell
> > Duke Bioinformatics Shared Resource
> >
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