Identifiers (was: [Biocorba-l] BSANE and bioCORBA)

Scott Markel smarkel@netgenics.com
Thu, 31 May 2001 06:55:39 -0700


Martin,

Martin Senger wrote:
> 
> >
> > We've actually combined URIs and NS syntax internally.  Examples
> > include
> >
> > * "x-sequence-na:gb.123:AL121903.13"
> >   version 13 of sequence AL121903 in GenBank release 123.
> >
>    Interesting.
>    What the first field (x-sequence-na) means, or can contain?

The URN's Namespace Identifiers are the content types

· application
· expression
· map
· genomic
· physical
· query
· sequence
· sequence-alignment
· sequence-pattern
· structure
· user

Using the BSA pattern, db.release/id.version, as the URN's Namespace
Specific String, results in identifiers of the form

  x-contentType:repository.release:id.version

Scott

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Scott Markel, Ph.D.       NetGenics, Inc.
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