[Open-bio-l] Best practice for modelling data in GFF
dan.bolser at gmail.com
Fri May 28 12:29:10 EDT 2010
Not sure if this is the right forum, but I just thought I'd ask...
Where can I find information on 'best practices' for modelling
biological data in GFF?
For example, I'd like to model paired-end sequence alignments in GFF.
One suggestion was to use match/match_part to link each end into a
pair. Another option is to use 'read_pair' with 'contig' for the
Should I just be using SAM/BAM?
Seems a shame not to have a standard way to do this in GFF...
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