<?xml version="1.0" encoding="UTF-8"?>
<s:scufl xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha" version="0.2" log="0">
  <s:workflowdescription lsid="urn:lsid:net.sf.taverna:wfDefinition:cf3bb3f6-aa37-4719-b75b-9ab562992a36" author="" title="automatically generated workflow" />
  <s:processor name="fromFASTAToAminoAcidSequence1">
    <s:description>Converts aminoacid FASTA sequence into an aminoacid sequence</s:description>
    <s:biomobywsdl>
      <s:mobyEndpoint>http://moby.ucalgary.ca/moby/MOBY-Central.pl</s:mobyEndpoint>
      <s:serviceName>fromFASTAToAminoAcidSequence</s:serviceName>
      <s:authorityName>genome.imim.es</s:authorityName>
    </s:biomobywsdl>
  </s:processor>
  <s:processor name="runDecypherBlastp0">
    <s:description>Compares an aminoacid sequence to an aminoacid target database and calculates the statistical significance of matches using the Basic Local Alignment Tool (BLAST).</s:description>
    <s:biomobywsdl>
      <s:mobyEndpoint>http://moby.ucalgary.ca/moby/MOBY-Central.pl</s:mobyEndpoint>
      <s:serviceName>runDecypherBlastp</s:serviceName>
      <s:authorityName>www.cnio.es</s:authorityName>
      <s:Parameter s:name="database">Swissprot</s:Parameter>
      <s:Parameter s:name="evalue">10</s:Parameter>
    </s:biomobywsdl>
  </s:processor>
  <s:processor name="String__2">
    <s:biomobyobject>
      <s:mobyEndpoint>http://moby.ucalgary.ca/moby/MOBY-Central.pl</s:mobyEndpoint>
      <s:serviceName>String</s:serviceName>
      <s:authorityName />
    </s:biomobyobject>
  </s:processor>
  <s:processor name="Processor_to_parse_the_datatype_BLAST_Text">
    <s:description>Processor to parse the datatype BLAST-Text</s:description>
    <s:biomobyparser>
      <s:endpoint>http://moby.ucalgary.ca/moby/MOBY-Central.pl</s:endpoint>
      <s:datatype>BLAST-Text</s:datatype>
      <s:articleName>blast_report</s:articleName>
      <s:description>Processor to parse the datatype BLAST-Text</s:description>
    </s:biomobyparser>
  </s:processor>
  <s:processor name="FASTA_AA__1">
    <s:biomobyobject>
      <s:mobyEndpoint>http://moby.ucalgary.ca/moby/MOBY-Central.pl</s:mobyEndpoint>
      <s:serviceName>FASTA_AA</s:serviceName>
      <s:authorityName />
    </s:biomobyobject>
  </s:processor>
  <s:link source="FASTA_AA__1:mobyData" sink="fromFASTAToAminoAcidSequence1:FASTA_AA(sequence)" />
  <s:link source="String__2:mobyData" sink="FASTA_AA__1:String(content)" />
  <s:link source="String__2__input" sink="String__2:value" />
  <s:link source="fromFASTAToAminoAcidSequence1:AminoAcidSequence(sequence)" sink="runDecypherBlastp0:AminoAcidSequence(sequence)" />
  <s:link source="Processor_to_parse_the_datatype_BLAST_Text:blast_report_'content'" sink="output_1" />
  <s:link source="runDecypherBlastp0:BLAST-Text(blast_report)" sink="Processor_to_parse_the_datatype_BLAST_Text:mobyData('BLAST-Text')" />
  <s:source name="String__2__input" />
  <s:sink name="output_1" />
</s:scufl>

