./install installing EMBOSS Explorer perl modules... Writing Makefile for EMBOSS::GUI Manifying blib/man3/EMBOSS::GUI.3pm Manifying blib/man3/EMBOSS::ACD.3pm Manifying blib/man3/EMBOSS::GUI::Conf.3pm Manifying blib/man3/EMBOSS::GUI::XHTML.3pm Installing /usr/local/share/perl/5.8.7/EMBOSS/GUI/Conf.pm Writing /usr/local/lib/perl/5.8.7/auto/EMBOSS/GUI/.packlist Appending installation info to /usr/local/lib/perl/5.8.7/perllocal.pod installing EMBOSS Explorer GUI components... I need to collect some information in order to install EMBOSS Explorer: Where was EMBOSS installed? (default is /usr/local) /usr/local/bin Where should the EMBOSS Explorer HTML files be installed? (default is /var/www/html/emboss) What is the URL prefix corresponding to the HTML directory above? (default is /emboss) Where should the EMBOSS Explorer CGI script be installed? (default is /var/www/cgi-bin/emboss) What is the complete URL corresponding to the CGI script '/var/www/cgi-bin/emboss'? (default is /cgi-bin/emboss) installing HTML files to /var/www/html/emboss... creating HTML index file at /var/www/html/emboss/index.html... creating output directory at /var/www/html/emboss/output... installing CGI script to /var/www/cgi-bin/emboss... copying manual support files to /var/www/html/emboss/manual... find: /usr/local/bin/share/EMBOSS/doc/programs: No such file or directory fixing permissions... EMBOSS Explorer is installed. Visit /cgi-bin/emboss to test it out. Site configuration (including a list of applications to be excluded from public access) is stored in the EMBOSS::GUI::Conf module (located at /usr/local/share/perl/5.8.7/EMBOSS/GUI/Conf.pm). The main style sheet, which can be edited to customize the appearance of EMBOSS Explorer is /var/www/html/emboss/style/emboss.css. If you prefer the look and feel of the old EMBOSS GUI, you can use /var/www/html/emboss/style/classic.css instead (the style sheet is specified in the EMBOSS::GUI::Conf module). EMBOSS Explorer generates temporary output files every time an application is used. Depending on the tasks being performed, these output files can consume space fairly quickly. The old output can be cleaned up on a regular basis by adding a task to the root user's crontab. The following example runs every morning at 0400 and removes all output files that have not been accessed in the last 24 hours: 0 4 * * * find /var/www/html/emboss/output -type d -mindepth 1 -maxdepth 1 -atime 1 -exec rm -rf {} \; Please report any errors or strange occurrences using the bug tracker at http://sourceforge.net/tracker/?func=add&group_id=124389&atid=699414