<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.0 Transitional//EN">
<HTML><HEAD>
<META HTTP-EQUIV="Content-Type" CONTENT="text/html; charset=us-ascii">
<TITLE>Message</TITLE>
<META content="MSHTML 6.00.2800.1170" name=GENERATOR></HEAD>
<BODY>
<DIV><SPAN class=334274022-04062003><FONT face=Arial size=2>Dear EMBOSS
team,</FONT></SPAN></DIV>
<DIV><FONT face=Arial size=2></FONT> </DIV>
<DIV><SPAN class=334274022-04062003><FONT face=Arial size=2>I noticed that there
is a change </FONT></SPAN><SPAN class=334274022-04062003><FONT face=Arial
size=2>in input parameter for a single sequence in programs
</FONT></SPAN></DIV>
<DIV><SPAN class=334274022-04062003><FONT face=Arial size=2>like dot*,
</FONT></SPAN><SPAN class=334274022-04062003><FONT face=Arial size=2>water etc.
which breaks their functioning in SRS, as it will do in many
sequence</FONT></SPAN></DIV>
<DIV><SPAN class=334274022-04062003><FONT face=Arial size=2>handling scripts.
</FONT></SPAN><SPAN class=334274022-04062003><FONT face=Arial size=2>The
"Changelog" isn't all </FONT></SPAN><SPAN class=334274022-04062003><FONT
face=Arial size=2>the clear about this too.</FONT></SPAN></DIV>
<DIV><SPAN class=334274022-04062003><FONT face=Arial
size=2></FONT></SPAN> </DIV>
<DIV><SPAN class=334274022-04062003><FONT face=Arial size=2>There may be other
new undiscovered "features" as well that I didn't see yet - and
don't</FONT></SPAN></DIV>
<DIV><SPAN class=334274022-04062003><FONT face=Arial size=2>have the time to
find out be trial and error. For the time being I see no other option
than</FONT></SPAN></DIV>
<DIV><SPAN class=334274022-04062003><FONT face=Arial size=2>to reinstall EMBOSS
2.6.0 again to retain full functionality :-((</FONT></SPAN></DIV>
<DIV><SPAN class=334274022-04062003><FONT face=Arial
size=2></FONT></SPAN> </DIV>
<DIV><SPAN class=334274022-04062003><FONT face=Arial size=2>It would be nice if
these things would be communicated more clearly well in advance
of</FONT></SPAN></DIV>
<DIV><SPAN class=334274022-04062003><FONT face=Arial size=2>a new major release,
and if there would be some form of downward compatibility to
the</FONT></SPAN></DIV>
<DIV><SPAN class=334274022-04062003><FONT face=Arial size=2>"old" way of
sequence specification.</FONT></SPAN></DIV>
<DIV><SPAN class=334274022-04062003><FONT face=Arial
size=2></FONT></SPAN> </DIV>
<DIV><SPAN class=334274022-04062003><FONT face=Arial
size=2>Regards,</FONT></SPAN></DIV>
<DIV><SPAN class=334274022-04062003><FONT face=Arial
size=2>Jack</FONT></SPAN></DIV>
<DIV><SPAN class=334274022-04062003><FONT face=Arial
size=2></FONT></SPAN> </DIV>
<DIV><SPAN class=334274022-04062003></SPAN> </DIV>
<DIV class=MsoAutoSig><SPAN lang=EN-US style="mso-ansi-language: EN-US"><FONT
face=Arial size=2>Jack Leunissen</FONT></SPAN></DIV>
<DIV class=MsoAutoSig><SPAN lang=EN-US style="mso-ansi-language: EN-US"><FONT
face=Arial><FONT size=2>Genome Informatics<?xml:namespace prefix = o ns =
"urn:schemas-microsoft-com:office:office"
/><o:p></o:p></FONT></FONT></SPAN></DIV>
<DIV class=MsoAutoSig><SPAN lang=EN-US style="mso-ansi-language: EN-US"><FONT
face=Arial><FONT size=2>Wageningen
University<o:p></o:p></FONT></FONT></SPAN></DIV>
<DIV class=MsoAutoSig><SPAN lang=EN-US style="mso-ansi-language: EN-US"><FONT
face=Arial><FONT size=2>6703 HA Wageningen,
NL<o:p></o:p></FONT></FONT></SPAN></DIV>
<DIV class=Section1>
<P class=MsoAutoSig><SPAN lang=EN-US
style="mso-ansi-language: EN-US"><o:p> </o:p></SPAN></P></DIV>
<DIV> </DIV></BODY></HTML>