<br><font size=2 face="sans-serif">Hello Everyone,</font>
<br>
<br><font size=2 face="sans-serif">I would like to use EMBOSS version 2.6.0 together with the GCG Wisconsin package version 10.3</font>
<br><font size=2 face="sans-serif">on a Red Hat 7.2 linux server. I followed the installation instructions from the administrators guide</font>
<br><font size=2 face="sans-serif">and doing the usual</font>
<br>
<br><font size=2 face="sans-serif">./configure</font>
<br><font size=2 face="sans-serif">make </font>
<br><font size=2 face="sans-serif">make install</font>
<br>
<br><font size=2 face="sans-serif">I compiled and installed emboss on my system without any error messages. But when I want to make</font>
<br><font size=2 face="sans-serif">indexes from a gcg database I run into troubles. See the following output of an interactive session:</font>
<br>
<br><font size=2 face="Courier">14:18 [root@kepler] ~/Temp # dbigcg</font>
<br><font size=2 face="Courier">Index a GCG formatted database</font>
<br><font size=2 face="Courier"> EMBL : EMBL</font>
<br><font size=2 face="Courier"> SWISS : Swiss-Prot, SpTrEMBL, TrEMBLnew</font>
<br><font size=2 face="Courier"> GENBANK : Genbank, DDBJ</font>
<br><font size=2 face="Courier"> PIR : NBRF</font>
<br><font size=2 face="Courier">Entry format [EMBL]:</font>
<br><font size=2 face="Courier">Database directory [.]: /usr/local/share/EMBOSS/data/GCG_DATABASES/gcgembl</font>
<br><font size=2 face="Courier">Wildcard database filename [*.seq]:</font>
<br><font size=2 face="Courier">Database name: embl</font>
<br><font size=2 face="Courier">Release number [0.0]: 73.0</font>
<br><font size=2 face="Courier">Index date [00/00/00]: 01/12/02</font>
<br>
<br><font size=2 face="Courier"> EMBOSS An error in embdbi.c at line 590:</font>
<br><font size=2 face="Courier">Cannot open embl.idsrt for reading</font>
<br>
<br><font size=2><tt>14:21 [root@kepler] ~/Temp # ll</tt></font>
<br><font size=2><tt>total 252k</tt></font>
<br><font size=2><tt>drwxr-xr-x 2 root root 4.0k May 8 14:18 ./</tt></font>
<br><font size=2><tt>drwxr-x--- 24 root root 4.0k May 8 14:15 ../</tt></font>
<br><font size=2><tt>-rw------- 1 root root 1.4M May 8 14:18 core</tt></font>
<br><font size=2><tt>-rw-r--r-- 1 root root 1.5k May 8 14:18 division.lkp</tt></font>
<br><font size=2><tt>-rw-r--r-- 1 root root 675 May 8 14:18 embl001.acnum</tt></font>
<br><font size=2><tt>-rw-r--r-- 1 root root 104 May 8 14:18 embl002.acnum</tt></font>
<br><font size=2><tt>-rw-r--r-- 1 root root 504 May 8 14:18 embl003.acnum</tt></font>
<br><font size=2><tt>-rw-r--r-- 1 root root 51 May 8 14:18 embl004.acnum</tt></font>
<br><font size=2><tt>-rw-r--r-- 1 root root 0 May 8 14:18 embl005.acnum</tt></font>
<br><font size=2><tt>-rw-r--r-- 1 root root 0 May 8 14:18 embl006.acnum</tt></font>
<br><font size=2><tt>-rw-r--r-- 1 root root 0 May 8 14:18 embl007.acnum</tt></font>
<br><font size=2><tt>-rw-r--r-- 1 root root 126 May 8 14:18 embl008.acnum</tt></font>
<br><font size=2><tt>-rw-r--r-- 1 root root 0 May 8 14:18 embl009.acnum</tt></font>
<br><font size=2><tt>-rw-r--r-- 1 root root 0 May 8 14:18 embl010.acnum</tt></font>
<br><font size=2><tt>-rw-r--r-- 1 root root 0 May 8 14:18 embl011.acnum</tt></font>
<br><font size=2><tt>-rw-r--r-- 1 root root 0 May 8 14:18 embl012.acnum</tt></font>
<br><font size=2><tt>-rw-r--r-- 1 root root 36 May 8 14:18 embl013.acnum</tt></font>
<br><font size=2><tt>-rw-r--r-- 1 root root 25k May 8 14:18 embl014.acnum</tt></font>
<br><font size=2><tt>-rw-r--r-- 1 root root 161 May 8 14:18 embl015.acnum</tt></font>
<br><font size=2><tt>-rw-r--r-- 1 root root 850 May 8 14:18 embl016.acnum</tt></font>
<br><font size=2><tt>-rw-r--r-- 1 root root 1.3k May 8 14:18 embl017.acnum</tt></font>
<br><font size=2><tt>-rw-r--r-- 1 root root 2.6k May 8 14:18 embl018.acnum</tt></font>
<br><font size=2><tt>-rw-r--r-- 1 root root 121 May 8 14:18 embl019.acnum</tt></font>
<br><font size=2><tt>-rw-r--r-- 1 root root 290 May 8 14:18 embl020.acnum</tt></font>
<br><font size=2><tt>-rw-r--r-- 1 root root 0 May 8 14:18 embl021.acnum</tt></font>
<br><font size=2><tt>-rw-r--r-- 1 root root 104 May 8 14:18 embl022.acnum</tt></font>
<br><font size=2><tt>-rw-r--r-- 1 root root 188 May 8 14:18 embl023.acnum</tt></font>
<br><font size=2><tt>-rw-r--r-- 1 root root 0 May 8 14:18 embl024.acnum</tt></font>
<br><font size=2><tt>-rw-r--r-- 1 root root 34 May 8 14:18 embl025.acnum</tt></font>
<br><font size=2><tt>-rw-r--r-- 1 root root 14 May 8 14:18 embl026.acnum</tt></font>
<br><font size=2><tt>-rw-r--r-- 1 root root 490 May 8 14:18 embl027.acnum</tt></font>
<br><font size=2><tt>-rw-r--r-- 1 root root 300 May 8 14:18 entrynam.idx</tt></font>
<br><font size=2><tt>-rw------- 1 root root 0 May 8 14:18 sort9YCQfK</tt></font>
<br>
<br><font size=2 face="sans-serif">Can somebody help me? Have I done something wrong during the compilation step of emboss?</font>
<br><font size=2 face="sans-serif">Any hint would help me.</font>
<br>
<br><font size=2 face="sans-serif">Thanks in advance...</font>
<br>
<br><font size=2 face="sans-serif">All the best,<br>
<br>
<br>
Stephan</font>