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<DIV><SPAN class=752314415-05032003><FONT face=Arial color=#0000ff size=2>You
could try putting your BLAST results into <A
href="http://abs.cit.nih.gov/blast/">http://abs.cit.nih.gov/blast/</A> which
will covert them to fasta format, and then you can carry on with your multiple
sequence alignment.</FONT></SPAN></DIV>
<DIV><SPAN class=752314415-05032003><FONT face=Arial color=#0000ff
size=2></FONT></SPAN> </DIV>
<DIV><SPAN class=752314415-05032003><FONT face=Arial color=#0000ff
size=2>Discussions abound as to who might write a BLAST wrapper or EMBOSS, but
nothing has happened so far, although there are offers!</FONT></SPAN></DIV>
<DIV><SPAN class=752314415-05032003><FONT face=Arial color=#0000ff
size=2></FONT></SPAN> </DIV>
<DIV><SPAN class=752314415-05032003><FONT face=Arial color=#0000ff
size=2>HTH</FONT></SPAN></DIV>
<DIV><SPAN class=752314415-05032003><FONT face=Arial color=#0000ff
size=2></FONT></SPAN> </DIV>
<DIV><SPAN class=752314415-05032003><FONT face=Arial color=#0000ff
size=2>Lisa Mullan</FONT></SPAN></DIV>
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<DIV class=OutlookMessageHeader dir=ltr align=left><FONT face=Tahoma
size=2>-----Original Message-----<BR><B>From:</B> owner-emboss@hgmp.mrc.ac.uk
[mailto:owner-emboss@hgmp.mrc.ac.uk]<B>On Behalf Of </B>Jean-Christophe
AME<BR><B>Sent:</B> Wednesday, March 05, 2003 3:44 PM<BR><B>To:</B>
emboss@hgmp.mrc.ac.uk<BR><B>Subject:</B> Mutiple alignement of blast
results<BR><BR></FONT></DIV>Hi all,<BR>I am looking for a program (preferably
for unix or Mac) that does a multiple alignment of a blast result. There used
to be Mulblast (http://www.cbs.cnrs.fr/Soft_ModMol/MulBlast/MulBlast-en.html)
but it doesn't seem to work anymore with the last blast outputs.<BR><BR>Does
anybody have any idea on the subject. This could be a nice and useful EMBOSS
program.<BR>Thanks for any
help.<BR>Jean-Christophe<BR><BR><BR><BR>________________________<BR>Jean-Christophe
Amé, PhD<BR>U.P.R. 9003 du CNRS - Cancérogénèse et Mutagénèse Moléculaire et
Structurale<BR>École Supérieure de Biotechnologie de Strasbourg<BR>Pôle
API<BR>Boulevard Sébastien-Brant<BR>67400 Illkirch<BR>France<BR><BR>tel.: 33 3
90 24 47 05<BR>Fax.: 33 3 90 24 46 86<BR><BR><U><?color><?param 1A1A,1A1A,FFFF>http://parplink.u-strasbg.fr<?/color></U><BR><U><?color><?param 1A1A,1A1A,FFFF>http://www-esbs.u-strasbg.fr/centrerech/upr9003/upr9003.html<?/color></U></BLOCKQUOTE></BODY></HTML>