[DAS2] Accelerating interval queries

Steve Chervitz Steve_Chervitz at affymetrix.com
Mon Jun 25 20:20:39 EDT 2007


Of potential interest to genome DAS server implementers:

Nested Containment List (NCList): a new algorithm for accelerating interval
query of genome alignment and interval databases

http://bioinformatics.oxfordjournals.org/cgi/content/abstract/23/11/1386

Any comments on this approach or comparison with other methods?

Steve




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