[BioSQL-l] small "bug" correction in package BioSql

[Hilmar Lapp]

Just FYI, I added a section to this extent to the Enhancement Requests:

http://www.biosql.org/wiki/ 
Enhancement_Requests#Check_constraint_on_biosequence.alphabet

Feel free to fix/add as appropriate.

	-hilmar

On Nov 9, 2007, at 7:42 AM, Richard Holland wrote:

> I did a bit of poking around in our code and internally BioJava
> represents all the default alphabet names (Protein, DNA, etc.) in  
> upper
> case. It also allows for mixed case alphabet names.
>
> It's not quite as easy as I thought to change these to lower case as
> they are often referenced by text name, meaning other people's code
> might break if I change them.
>
> Also, as it allows for mixed-case alphabet names, I can't do a
> toUpper/toLower fudge on persistence to BioSQL, as I wouldn't
> necessarily get out what I put in!

-- 
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: Hilmar Lapp  -:-  Durham, NC  -:-  hlapp at gmx dot net :
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