--- lib/bio/db/pdb/chain.rb 2007-12-18 13:48:42.000000000 +0000 +++ lib/bio/db/pdb/chain_mod.rb 2008-04-01 02:33:44.000000000 +0100 @@ -189,7 +189,7 @@ x.times { string << 'X' } end tlc = residue.resName.capitalize - olc = (Bio::AminoAcid.three2one(tlc) or 'X') + olc = (Bio::AminoAcid.three2one(tlc) or 'X' rescue 'X') string << olc end @aaseq = Bio::Sequence::AA.new(string)