blastp blastp 2.2.10 [Oct-19-2004] ~Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, ~Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), ~"Gapped BLAST and PSI-BLAST: a new generation of protein database search~programs", Nucleic Acids Res. 25:3389-3402. /usr/home/halima/Tblast/tprotein.fdb lcl|QUERY aq_001 elongation factor EF-G (fusA) {Aquifex aeolicus VF5} 699 BLOSUM62 10 11 1 S 1 1 gnl|BL_ORD_ID|0 aq_001 elongation factor EF-G (fusA) {Aquifex aeolicus VF5} 0 699 1 1394.41 3608 0 1 699 1 699 1 1 699 699 699 MAREVPIEKLRNIGIVAHIDAGKTTTTERILYYTGKTYKIGEVHEGAATMDWMPQEKERGITITVATTACYWTRNGERYQINIIDTPGHVDFSVEVVRSMKVLDGIVFIFSAVEGVQPQSEANWRWADRFQVPRIAFINKMDRLGADFYRVFKEIEEKLTIKPVAIQIPLGAEDQFEGVIDLMEMKAIRWLEETLGAKYEVVDIPPEYQEKAQEWREKMIETIVETDDELMEKYLEGQEISIDELRKALRKATIERKLVPVLCGSAFKNKGVQPLLDAVIDYLPSPIDLPPVKGTNPKTGEEEVRHPSDDEPFCAYAFKVMSDPYAGQLTYIRVFSGTLKAGSYVYNATKDEKQRAGRLLLMHANSREEIQQVSAGEICAVVGLDAATGDTLCDEKHPIILEKLEFPDPVISMAIEPKTKKDQEKLSQVLNKFMKEDPTFRATTDPETGQILIHGMGELHLEIMVDRMKREYGIEVNVGKPQVAYKETIRKKAIGEGKFIKQTGGRGQYGHAIIEIEPLPRGAGFEFIDDIHGGVIPKEFIPSVEKGVKEAMQNGILAGYPVVDVRVRLFDGSYHEVDSSDIAFQVAGSLAFKDAAKKADPVLLEPIMEVEVETPEKYVGDVIGDLNSRRGKIMGMENKGVITVIKAHVPLAEMFGYATTLRSLTQGRGTFIMKFSHYDEVPQQIAEKIIGERMAGKSS MAREVPIEKLRNIGIVAHIDAGKTTTTERILYYTGKTYKIGEVHEGAATMDWMPQEKERGITITVATTACYWTRNGERYQINIIDTPGHVDFSVEVVRSMKVLDGIVFIFSAVEGVQPQSEANWRWADRFQVPRIAFINKMDRLGADFYRVFKEIEEKLTIKPVAIQIPLGAEDQFEGVIDLMEMKAIRWLEETLGAKYEVVDIPPEYQEKAQEWREKMIETIVETDDELMEKYLEGQEISIDELRKALRKATIERKLVPVLCGSAFKNKGVQPLLDAVIDYLPSPIDLPPVKGTNPKTGEEEVRHPSDDEPFCAYAFKVMSDPYAGQLTYIRVFSGTLKAGSYVYNATKDEKQRAGRLLLMHANSREEIQQVSAGEICAVVGLDAATGDTLCDEKHPIILEKLEFPDPVISMAIEPKTKKDQEKLSQVLNKFMKEDPTFRATTDPETGQILIHGMGELHLEIMVDRMKREYGIEVNVGKPQVAYKETIRKKAIGEGKFIKQTGGRGQYGHAIIEIEPLPRGAGFEFIDDIHGGVIPKEFIPSVEKGVKEAMQNGILAGYPVVDVRVRLFDGSYHEVDSSDIAFQVAGSLAFKDAAKKADPVLLEPIMEVEVETPEKYVGDVIGDLNSRRGKIMGMENKGVITVIKAHVPLAEMFGYATTLRSLTQGRGTFIMKFSHYDEVPQQIAEKIIGERMAGKSS MAREVPIEKLRNIGIVAHIDAGKTTTTERILYYTGKTYKIGEVHEGAATMDWMPQEKERGITITVATTACYWTRNGERYQINIIDTPGHVDFSVEVVRSMKVLDGIVFIFSAVEGVQPQSEANWRWADRFQVPRIAFINKMDRLGADFYRVFKEIEEKLTIKPVAIQIPLGAEDQFEGVIDLMEMKAIRWLEETLGAKYEVVDIPPEYQEKAQEWREKMIETIVETDDELMEKYLEGQEISIDELRKALRKATIERKLVPVLCGSAFKNKGVQPLLDAVIDYLPSPIDLPPVKGTNPKTGEEEVRHPSDDEPFCAYAFKVMSDPYAGQLTYIRVFSGTLKAGSYVYNATKDEKQRAGRLLLMHANSREEIQQVSAGEICAVVGLDAATGDTLCDEKHPIILEKLEFPDPVISMAIEPKTKKDQEKLSQVLNKFMKEDPTFRATTDPETGQILIHGMGELHLEIMVDRMKREYGIEVNVGKPQVAYKETIRKKAIGEGKFIKQTGGRGQYGHAIIEIEPLPRGAGFEFIDDIHGGVIPKEFIPSVEKGVKEAMQNGILAGYPVVDVRVRLFDGSYHEVDSSDIAFQVAGSLAFKDAAKKADPVLLEPIMEVEVETPEKYVGDVIGDLNSRRGKIMGMENKGVITVIKAHVPLAEMFGYATTLRSLTQGRGTFIMKFSHYDEVPQQIAEKIIGERMAGKSS 2 gnl|BL_ORD_ID|1 aq_005 elongation factor EF-Tu (tufA1) {Aquifex aeolicus VF5} 1 405 1 69.3218 168 5.91332e-15 12 211 14 218 1 1 59 96 21 213 NIGIVAHIDAGKTTTTERILYYTGKTYKIGEVHEGAAT------MDWMPQEKERGITITVATTACYWTRNGERYQINIIDTPGHVDFSVEVVRSMKVLDGIVFIFSAVEGVQPQSEANWRWADRFQVPRI-AFINKMDRLGADFYRVFKEIEEKLTIKPVAI---QIPLGAEDQFEGVIDLMEMKAIRWLE---ETLGAKYEVVDIPPEYQEK NVGTIGHVDHGKSTLTSAITCVLAA----GLVEGGKAKCFKYEEIDKAPEEKERGITINI-THVEYET--AKRHYAHV-DCPGHADYIKNMITGAAQMDGAILVVSAADGPMPQTREHVLLARQVNVPYIVVFMNKCDMVDDEELLELVELEVRELLSKYEYPGDEVPVIRGSALGALQELEQNSPGKWVESIKELLNAMDEYIPTPQREVDK N+G + H+D GK+T T I G V G A +D P+EKERGITI + T Y T +R+ ++ D PGH D+ ++ +DG + + SA +G PQ+ + A + VP I F+NK D + + E+E + + ++P+ + +L + +W+E E L A E + P +K 2 25.409 54 0.0979235 232 345 148 252 1 1 34 51 35 127 EKYLEGQEISIDELRKALRKATIERKLVPVLCGSAFKN-------------KGVQPLLDAVIDYLPSPIDLPPVKGTNPKTGEEEVRHPSDDEPFCAYAFKVMSDPYAGQLTYIRVFSGTLKAGSYV EELLELVEL---EVRELLSKYEYPGDEVPVIRGSALGALQELEQNSPGKWVESIKELLNAMDEYIPTP--------------QREV-----DKPFLMPIEDVFSISGRGTVVTGRVERGVLRPGDEV E+ LE E+ E+R+ L K VPV+ GSA + ++ LL+A+ +Y+P+P + EV D+PF V S G + RV G L+ G V 3 gnl|BL_ORD_ID|14 aq_023 N-acetylornithine aminotransferase (argD) {Aquifex aeolicus VF5} 14 376 1 20.0162 40 4.11415 192 227 172 207 1 1 11 17 36 EETLGAKYEVVDIPPEYQEKAQEWREKMIETIVETD EETAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKD EET G EV+ E ++++ K+ E E D 4 gnl|BL_ORD_ID|9 aq_017 ribosomal protein S03 (rpsC) {Aquifex aeolicus VF5} 9 212 1 19.631 39 5.37324 224 242 84 102 1 1 9 13 19 VETDDELMEKYLEGQEISI VENLKKTLEKMLPGKEITI VE + +EK L G+EI+I 5 gnl|BL_ORD_ID|23 ECs0004 threonine synthase {Escherichia coli O157:H7 VT2-Sakai} 23 428 1 18.8606 37 9.16536 679 688 65 74 1 1 6 9 10 DEVPQQIAEK DEIPQEILEE DE+PQ+I E+ 26 8241 56 4.36276e+06 0.041 0.267 0.14 blastp blastp 2.2.10 [Oct-19-2004] ~Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, ~Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), ~"Gapped BLAST and PSI-BLAST: a new generation of protein database search~programs", Nucleic Acids Res. 25:3389-3402. /usr/home/halima/Tblast/tprotein.fdb lcl|QUERY aq_005 elongation factor EF-Tu (tufA1) {Aquifex aeolicus VF5} 405 BLOSUM62 10 11 1 S 1 1 gnl|BL_ORD_ID|1 aq_005 elongation factor EF-Tu (tufA1) {Aquifex aeolicus VF5} 1 405 1 737.643 1903 0 1 405 1 405 1 1 374 374 405 MAKEKFERTKEHVNVGTIGHVDHGKSTLTSAITCVLAAGLVEGGKAKCFKYEEIDKAPEEKERGITINITHVEYETAKRHYAHVDCPGHADYIKNMITGAAQMDGAILVVSAADGPMPQTREHVLLARQVNVPYIVVFMNKCDMVDDXXXXXXXXXXXXXXXSKYEYPGDEVPVIRGSALGALQELEQNSPGKWVESIKELLNAMDEYIPTPQREVDKPFLMPIEDVFSISXXXXXXXXXXXXXXXXPGDEVEIVGLREEPLKTVATSIEMFRKVLDEALPGDNIGVLLRGVGKDDVERGQVLAQPGSVKAHKRFRAQVYVLSKEEGGRHTPFFVNYRPQFYFRTADVTGTVVKLPEGVEMVMPGDNVELEVELIAPVALEEGLRFAIREGGRTVGAGVVTKILD MAKEKFERTKEHVNVGTIGHVDHGKSTLTSAITCVLAAGLVEGGKAKCFKYEEIDKAPEEKERGITINITHVEYETAKRHYAHVDCPGHADYIKNMITGAAQMDGAILVVSAADGPMPQTREHVLLARQVNVPYIVVFMNKCDMVDDEELLELVELEVRELLSKYEYPGDEVPVIRGSALGALQELEQNSPGKWVESIKELLNAMDEYIPTPQREVDKPFLMPIEDVFSISGRGTVVTGRVERGVLRPGDEVEIVGLREEPLKTVATSIEMFRKVLDEALPGDNIGVLLRGVGKDDVERGQVLAQPGSVKAHKRFRAQVYVLSKEEGGRHTPFFVNYRPQFYFRTADVTGTVVKLPEGVEMVMPGDNVELEVELIAPVALEEGLRFAIREGGRTVGAGVVTKILD MAKEKFERTKEHVNVGTIGHVDHGKSTLTSAITCVLAAGLVEGGKAKCFKYEEIDKAPEEKERGITINITHVEYETAKRHYAHVDCPGHADYIKNMITGAAQMDGAILVVSAADGPMPQTREHVLLARQVNVPYIVVFMNKCDMVDD SKYEYPGDEVPVIRGSALGALQELEQNSPGKWVESIKELLNAMDEYIPTPQREVDKPFLMPIEDVFSIS PGDEVEIVGLREEPLKTVATSIEMFRKVLDEALPGDNIGVLLRGVGKDDVERGQVLAQPGSVKAHKRFRAQVYVLSKEEGGRHTPFFVNYRPQFYFRTADVTGTVVKLPEGVEMVMPGDNVELEVELIAPVALEEGLRFAIREGGRTVGAGVVTKILD 2 gnl|BL_ORD_ID|0 aq_001 elongation factor EF-G (fusA) {Aquifex aeolicus VF5} 0 699 1 66.2402 160 2.80879e-14 14 143 12 142 1 1 47 69 15 138 NVGTIGHVDHGKSTLTSAITCVLAA----GLVEGGKAKCFKYEEIDKAPEEKERGITINI-THVEYET--AKRHYAHV-DCPGHADYIKNMITGAAQMDGAILVVSAADGPMPQTREHVLLARQVNVPYIVVFMNKCD NIGIVAHIDAGKTTTTERILYYTGKTYKIGEVHEGAAT------MDWMPQEKERGITITVATTACYWTRNGERYQINIIDTPGHVDFSVEVVRSMKVLDGIVFIFSAVEGVQPQSEANWRWADRFQVPRI-AFINKMD N+G + H+D GK+T T I G V G A +D P+EKERGITI + T Y T +R+ ++ D PGH D+ ++ +DG + + SA +G PQ+ + A + VP I F+NK D 2 20.4014 41 1.76749 196 212 270 286 1 1 6 14 17 ESIKELLNAMDEYIPTP KGVQPLLDAVIDYLPSP + ++ LL+A+ +Y+P+P 3 19.2458 38 3.93756 50 63 198 211 1 1 7 10 14 KYEEIDKAPEEKER KYEVVDIPPEYQEK KYE +D PE +E+ 3 gnl|BL_ORD_ID|19 BCE0005 DNA gyrase, B subunit (gyrB) {Bacillus cereus 10987} 19 640 1 18.8606 37 5.14262 378 403 66 91 1 1 7 14 26 VALEEGLRFAIREGGRTVGAGVVTKI VSIEEDNSIRVTDNGRGIPVGIQEKM V++EE + + GR + G+ K+ 4 gnl|BL_ORD_ID|6 aq_013 ribosomal protein L02 (rplB) {Aquifex aeolicus VF5} 6 304 1 18.4754 36 6.71646 46 83 16 53 1 1 9 18 38 AKCFKYEEIDKAPEEKERGITINITHVEYETAKRHYAH AVLYDFEEIEKLVRKGKEWVLLKKNQVEPEKSLLKWWH A + +EEI+K + + + + VE E + + H 5 gnl|BL_ORD_ID|25 ECs0006 hypothetical protein {Escherichia coli O157:H7 VT2-Sakai} 25 258 1 18.0902 35 8.77197 369 382 183 196 1 1 7 10 14 ELEVELIAPVALEE KLNAEIIKPVFLDE +L E+I PV L+E 26 8241 51 2.44791e+06 0.041 0.267 0.14 blastp blastp 2.2.10 [Oct-19-2004] ~Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, ~Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), ~"Gapped BLAST and PSI-BLAST: a new generation of protein database search~programs", Nucleic Acids Res. 25:3389-3402. /usr/home/halima/Tblast/tprotein.fdb lcl|QUERY aq_008 ribosomal protein S10 (rpsJ) {Aquifex aeolicus VF5} 104 BLOSUM62 10 11 1 S 1 1 gnl|BL_ORD_ID|2 aq_008 ribosomal protein S10 (rpsJ) {Aquifex aeolicus VF5} 2 104 1 209.534 532 3.86751e-58 1 104 1 104 1 1 104 104 104 MEQEKIRIKLRAYDHRLLDQSVKQIIETVKRTGGVVKGPIPLPTRKRKWCVLRSPHKFDQSREHFEIREFSRILDIIRFTPQTIEALMEISLPAGVDVEVKMRG MEQEKIRIKLRAYDHRLLDQSVKQIIETVKRTGGVVKGPIPLPTRKRKWCVLRSPHKFDQSREHFEIREFSRILDIIRFTPQTIEALMEISLPAGVDVEVKMRG MEQEKIRIKLRAYDHRLLDQSVKQIIETVKRTGGVVKGPIPLPTRKRKWCVLRSPHKFDQSREHFEIREFSRILDIIRFTPQTIEALMEISLPAGVDVEVKMRG 2 gnl|BL_ORD_ID|4 aq_011 ribosomal protein L04 (rplD) {Aquifex aeolicus VF5} 4 199 1 20.0162 40 0.434602 33 48 75 96 1 1 11 11 6 22 GGVVKGP------IPLPTRKRK GGVAHGPKPRDYEYPLPKRVRK GGV GP PLP R RK 3 gnl|BL_ORD_ID|14 aq_023 N-acetylornithine aminotransferase (argD) {Aquifex aeolicus VF5} 14 376 1 18.0902 35 1.65149 15 35 167 188 1 1 9 14 1 22 HRLLDQSVKQII-ETVKRTGGV YKLLDEETAGIIIEVIQGEGGV ++LLD+ II E ++ GGV 4 gnl|BL_ORD_ID|19 BCE0005 DNA gyrase, B subunit (gyrB) {Bacillus cereus 10987} 19 640 1 17.705 34 2.15691 42 70 192 222 1 1 11 15 2 31 LPTRKRKWCVLRSPHKF--DQSREHFEIREF LATRMRELAFLNRNIKLTIEDKREHKQKKEF L TR R+ L K + REH + +EF 5 gnl|BL_ORD_ID|1 aq_005 elongation factor EF-Tu (tufA1) {Aquifex aeolicus VF5} 1 405 1 16.9346 32 3.67913 57 67 5 15 1 1 4 9 11 KFDQSREHFEI KFERTKEHVNV KF++++EH + 26 8241 40 460864 0.041 0.267 0.14 blastp blastp 2.2.10 [Oct-19-2004] ~Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, ~Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), ~"Gapped BLAST and PSI-BLAST: a new generation of protein database search~programs", Nucleic Acids Res. 25:3389-3402. /usr/home/halima/Tblast/tprotein.fdb lcl|QUERY aq_009 ribosomal protein L03 (rplC) {Aquifex aeolicus VF5} 241 BLOSUM62 10 11 1 S 1 1 gnl|BL_ORD_ID|3 aq_009 ribosomal protein L03 (rplC) {Aquifex aeolicus VF5} 3 241 1 492.271 1266 8.82615e-143 1 241 1 241 1 1 241 241 241 MPLGLIGEKVGMTRVLLKDGTAIPVTVIKFPVNYVVQVKSQNTKDGYNALQIGAYEAKEKHLTKPLIGHFKKHGVPLLRRLWEFRVDNPEEFQSGQQLKVEDVFKPGDLVDVWGISKGRGFAGAMKRWDFAGFPKSHGHRYHRAVGAIGQRTDPGRVWKGKRMPGHYGAKPVRVQGLFVVDVLPEENAILVKGSVPGHNKGIVVVEQSTIAYRKSQKLKQKRYQFIIENLAKEESQEVAES MPLGLIGEKVGMTRVLLKDGTAIPVTVIKFPVNYVVQVKSQNTKDGYNALQIGAYEAKEKHLTKPLIGHFKKHGVPLLRRLWEFRVDNPEEFQSGQQLKVEDVFKPGDLVDVWGISKGRGFAGAMKRWDFAGFPKSHGHRYHRAVGAIGQRTDPGRVWKGKRMPGHYGAKPVRVQGLFVVDVLPEENAILVKGSVPGHNKGIVVVEQSTIAYRKSQKLKQKRYQFIIENLAKEESQEVAES MPLGLIGEKVGMTRVLLKDGTAIPVTVIKFPVNYVVQVKSQNTKDGYNALQIGAYEAKEKHLTKPLIGHFKKHGVPLLRRLWEFRVDNPEEFQSGQQLKVEDVFKPGDLVDVWGISKGRGFAGAMKRWDFAGFPKSHGHRYHRAVGAIGQRTDPGRVWKGKRMPGHYGAKPVRVQGLFVVDVLPEENAILVKGSVPGHNKGIVVVEQSTIAYRKSQKLKQKRYQFIIENLAKEESQEVAES 2 gnl|BL_ORD_ID|19 BCE0005 DNA gyrase, B subunit (gyrB) {Bacillus cereus 10987} 19 640 1 21.557 44 0.441336 47 112 552 615 1 1 16 30 2 66 YNALQIGAYEAKEKHLTKPLIGHFKKHGVPLLRRLWEFRVDNPEEFQSGQQLKVEDVFKPGDLVDV YNEKELEKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMD--PEVRSLLQVSLQDAIEADETFEI YN ++ A+ KP I +K G +LWE +D E +S Q+ ++D + + ++ 3 gnl|BL_ORD_ID|18 BCE0004 DNA replication and repair protein RecF (recF) {Bacillus cereus 10987} 18 375 1 18.8606 37 2.86066 182 226 156 200 1 1 11 21 45 VLPEENAILVKGSVPGHNKGIVVVEQSTIAYRKSQKLKQKRYQFI VLTQRNHLLKKMQGNSKNEETMLDVFTLQLIEHGTKILQKRFEFL VL + N +L K N+ ++ + K+ QKR++F+ 2 17.705 34 6.37288 47 84 148 199 1 1 12 20 14 52 YNALQIGAYEAKEKHLTKPLIGHFK--------------KHGVPLLRRLWEF YELSQYQKVLTQRNHLLKKMQGNSKNEETMLDVFTLQLIEHGTKILQKRFEF Y Q + HL K + G+ K +HG +L++ +EF 4 gnl|BL_ORD_ID|24 ECs0005 hypothetical protein {Escherichia coli O157:H7 VT2-Sakai} 24 98 1 17.705 34 6.37288 148 166 36 54 1 1 7 8 19 IGQRTDPGRVWKGKRMPGH IGDRDNRGYYWDGGHWRDH IG R + G W G H 26 8241 47 1.36169e+06 0.041 0.267 0.14 blastp blastp 2.2.10 [Oct-19-2004] ~Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, ~Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), ~"Gapped BLAST and PSI-BLAST: a new generation of protein database search~programs", Nucleic Acids Res. 25:3389-3402. /usr/home/halima/Tblast/tprotein.fdb lcl|QUERY aq_011 ribosomal protein L04 (rplD) {Aquifex aeolicus VF5} 199 BLOSUM62 10 11 1 S 1 1 gnl|BL_ORD_ID|4 aq_011 ribosomal protein L04 (rplD) {Aquifex aeolicus VF5} 4 199 1 402.519 1033 7.2805e-116 1 199 1 199 1 1 199 199 199 MKIGDVEVRDDVFNVKVKKHVLWEVVKWQLAKRRQGTHSTKTRGEVAYSGRKILPQKGTGNARHGERGVNIFVGGGVAHGPKPRDYEYPLPKRVRKLGLKMALSDKARNNAIIFVDNIDLGKKPKTKKAIEFLKNLGVEKEKVLVVIPEKADVLYKSFRNLPNVRVLLPEGLNVYDVLWANKLVIQKDCLDRIYKKVEA MKIGDVEVRDDVFNVKVKKHVLWEVVKWQLAKRRQGTHSTKTRGEVAYSGRKILPQKGTGNARHGERGVNIFVGGGVAHGPKPRDYEYPLPKRVRKLGLKMALSDKARNNAIIFVDNIDLGKKPKTKKAIEFLKNLGVEKEKVLVVIPEKADVLYKSFRNLPNVRVLLPEGLNVYDVLWANKLVIQKDCLDRIYKKVEA MKIGDVEVRDDVFNVKVKKHVLWEVVKWQLAKRRQGTHSTKTRGEVAYSGRKILPQKGTGNARHGERGVNIFVGGGVAHGPKPRDYEYPLPKRVRKLGLKMALSDKARNNAIIFVDNIDLGKKPKTKKAIEFLKNLGVEKEKVLVVIPEKADVLYKSFRNLPNVRVLLPEGLNVYDVLWANKLVIQKDCLDRIYKKVEA 2 gnl|BL_ORD_ID|5 aq_012 ribosomal protein L23 (rplW) {Aquifex aeolicus VF5} 5 103 1 27.335 59 0.00636671 123 156 39 72 1 1 14 21 34 KPKTKKAIEFLKNLGVEKEKVLVVIPEKADVLYK KPEIKYAVEKLFNVKVKKVNTMIVKPKKKRVWNK KP+ K A+E L N+ V+K ++V P+K V K 2 18.8606 37 2.26444 10 19 47 56 1 1 7 9 10 DDVFNVKVKK EKLFNVKVKK + +FNVKVKK 3 gnl|BL_ORD_ID|18 BCE0004 DNA replication and repair protein RecF (recF) {Bacillus cereus 10987} 18 375 1 20.7866 42 0.595906 51 171 160 286 1 1 25 58 10 129 RKILPQKGTGNARHGERGVNIFVGGGVAHGPK--PRDYEYPLPKRVRKLGLKMALSDKARNNAIIFVDNIDLGKKPKTKKAIE-FLKNLGVEKEKVL-----VVIPEKADVLYKSFRNLPNVRVLLPEG RNHLLKKMQGNSKNEETMLDVFTLQLIEHGTKILQKRFEFLHLLQEWAAPIHRGISRGLEELEIVYKPSVDVSESMDLSKIKEVYYESFQSVKQREIFRGTTLIGPHRDDLQF--FVNSKNVQVFGSQG R L +K GN+++ E +++F + HG K + +E+ + + +S I++ ++D+ + K E + ++ K++ + ++ P + D+ + F N NV+V +G 4 gnl|BL_ORD_ID|2 aq_008 ribosomal protein S10 (rpsJ) {Aquifex aeolicus VF5} 2 104 1 20.0162 40 1.01646 75 96 33 48 1 1 11 11 6 22 GGVAHGPKPRDYEYPLPKRVRK GGVVKGP------IPLPTRKRK GGV GP PLP R RK 5 gnl|BL_ORD_ID|16 BCE0002 DNA polymerase III, beta subunit (dnaN-1) {Bacillus cereus 10987} 16 379 1 18.4754 36 2.95745 119 197 16 89 1 1 17 33 7 80 DLGKKPKTKKAIEFLKNLGV-EKEKVLVVIPEKADVLYKSFRNLPNVRVLLPEGLNVYDVLWANKLVIQKDCLDRIYKKV DVMKAVSSRTTIPILTGIKVVATEEGVTLTGSDADISIESFIPVEE------NGKEIVEVKQSGSIVLQAKYFSEIVKKL D+ K ++ I L + V E+ + + AD+ +SF + G + +V + +V+Q I KK+ 6 gnl|BL_ORD_ID|23 ECs0004 threonine synthase {Escherichia coli O157:H7 VT2-Sakai} 23 428 1 18.0902 35 3.86255 157 168 144 155 1 1 6 10 12 SFRNLPNVRVLL AFYGLPNVKVVI +F LPNV+V++ 7 gnl|BL_ORD_ID|19 BCE0005 DNA gyrase, B subunit (gyrB) {Bacillus cereus 10987} 19 640 1 17.3198 33 6.58852 20 26 43 49 1 1 4 7 7 HVLWEVV HLVWEIV H++WE+V 8 gnl|BL_ORD_ID|14 aq_023 N-acetylornithine aminotransferase (argD) {Aquifex aeolicus VF5} 14 376 1 17.3198 33 6.58852 183 192 358 367 1 1 6 9 10 LVIQKDCLDR LIIQKEHIDR L+IQK+ +DR 9 gnl|BL_ORD_ID|0 aq_001 elongation factor EF-G (fusA) {Aquifex aeolicus VF5} 0 699 1 17.3198 33 6.58852 118 136 411 429 1 1 8 11 19 IDLGKKPKTKKAIEFLKNL ISMAIEPKTKKDQEKLSQV I + +PKTKK E L + 26 8241 46 1.07788e+06 0.041 0.267 0.14 blastp blastp 2.2.10 [Oct-19-2004] ~Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, ~Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), ~"Gapped BLAST and PSI-BLAST: a new generation of protein database search~programs", Nucleic Acids Res. 25:3389-3402. /usr/home/halima/Tblast/tprotein.fdb lcl|QUERY aq_012 ribosomal protein L23 (rplW) {Aquifex aeolicus VF5} 103 BLOSUM62 10 11 1 S 1 1 gnl|BL_ORD_ID|5 aq_012 ribosomal protein L23 (rplW) {Aquifex aeolicus VF5} 5 103 1 210.69 535 1.74231e-58 1 103 1 103 1 1 103 103 103 MSQRKPWEIIIRPIITEKSNRLMEDYNKYTFEVALDASKPEIKYAVEKLFNVKVKKVNTMIVKPKKKRVWNKFRQYGTTKKWKKAIVTLEKGHKIDILEFAQK MSQRKPWEIIIRPIITEKSNRLMEDYNKYTFEVALDASKPEIKYAVEKLFNVKVKKVNTMIVKPKKKRVWNKFRQYGTTKKWKKAIVTLEKGHKIDILEFAQK MSQRKPWEIIIRPIITEKSNRLMEDYNKYTFEVALDASKPEIKYAVEKLFNVKVKKVNTMIVKPKKKRVWNKFRQYGTTKKWKKAIVTLEKGHKIDILEFAQK 2 gnl|BL_ORD_ID|4 aq_011 ribosomal protein L04 (rplD) {Aquifex aeolicus VF5} 4 199 1 27.335 59 0.002732 39 72 123 156 1 1 14 21 34 KPEIKYAVEKLFNVKVKKVNTMIVKPKKKRVWNK KPKTKKAIEFLKNLGVEKEKVLVVIPEKADVLYK KP+ K A+E L N+ V+K ++V P+K V K 2 18.8606 37 0.971688 47 56 10 19 1 1 7 9 10 EKLFNVKVKK DDVFNVKVKK + +FNVKVKK 3 gnl|BL_ORD_ID|25 ECs0006 hypothetical protein {Escherichia coli O157:H7 VT2-Sakai} 25 258 1 23.483 49 0.03945 27 64 153 191 1 1 14 20 1 39 NKYTFEVALDASKPEIKYAVEKLF-NVKVKKVNTMIVKP NKLNEALAAQGDNVVINLASDEYFKSVKPKKLNAEIIKP NK +A I A ++ F +VK KK+N I+KP 4 gnl|BL_ORD_ID|23 ECs0004 threonine synthase {Escherichia coli O157:H7 VT2-Sakai} 23 428 1 20.4014 41 0.333964 30 54 296 320 1 1 10 14 25 TFEVALDASKPEIKYAVEKLFNVKV TLSNAMDVSQPNNWPRVEELFRRKI T A+D S+P VE+LF K+ 5 gnl|BL_ORD_ID|15 BCE0001 chromosomal replication initiator protein DnaA (dnaA) {Bacillus cereus 10987} 15 446 1 17.3198 33 2.82718 46 89 4 43 1 1 11 21 4 44 VEKLFNVKVKKVNTMIVKPKKKRVWNKFRQYGTTKKWKKAIVTL ISDLWNSALKELEKKVSKPSYE-TWLKST---TAHNLKKDVLTI + L+N +K++ + KP + W K T KK ++T+ 6 gnl|BL_ORD_ID|0 aq_001 elongation factor EF-G (fusA) {Aquifex aeolicus VF5} 0 699 1 16.9346 32 3.69241 7 45 215 252 1 1 10 19 1 39 WEIIIRPIITEKSNRLMEDYNKYTFEVALDASKPEIKYA WREKMIETIVETDDELMEKYLEGQ-EISIDELRKALRKA W + I E + LME Y + E+++D + ++ A 7 gnl|BL_ORD_ID|3 aq_009 ribosomal protein L03 (rplC) {Aquifex aeolicus VF5} 3 241 1 16.1642 30 6.2983 77 94 123 140 1 1 6 8 18 GTTKKWKKAIVTLEKGHK GAMKRWDFAGFPKSHGHR G K+W A GH+ 26 8241 39 462528 0.041 0.267 0.14 blastp blastp 2.2.10 [Oct-19-2004] ~Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, ~Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), ~"Gapped BLAST and PSI-BLAST: a new generation of protein database search~programs", Nucleic Acids Res. 25:3389-3402. /usr/home/halima/Tblast/tprotein.fdb lcl|QUERY aq_013 ribosomal protein L02 (rplB) {Aquifex aeolicus VF5} 304 BLOSUM62 10 11 1 S 1 1 gnl|BL_ORD_ID|6 aq_013 ribosomal protein L02 (rplB) {Aquifex aeolicus VF5} 6 304 1 607.446 1565 2.45612e-177 1 304 1 304 1 1 291 291 304 MGVRKLKPVTNGTRHAVLYDFEEIEKLVRKGKEWVLLKKNQVEPEKSLLKWWHRAKGRSRQRGNITARHRGGGHKKLYRIIDFKRDKSLVPAKVVSIEYDPFRSARICLLHYADGEKRYIIWPEGLKVGDTVMSISWEDAEAGKPLPEIKPGNAMPLKYIPEGTIVHNIEFIPGKGGQIARAAGTWAQVLGRSTRKGYVLVRMPSGEVRMIHERCMATVGRVGLAEHELVKLGKAGRARWLGWRPHTRGTAMNPVDHPHGGGEGRTRGKHPESPWGWXXXXXXXXXXXXXSDQFIVTRRDGRPL MGVRKLKPVTNGTRHAVLYDFEEIEKLVRKGKEWVLLKKNQVEPEKSLLKWWHRAKGRSRQRGNITARHRGGGHKKLYRIIDFKRDKSLVPAKVVSIEYDPFRSARICLLHYADGEKRYIIWPEGLKVGDTVMSISWEDAEAGKPLPEIKPGNAMPLKYIPEGTIVHNIEFIPGKGGQIARAAGTWAQVLGRSTRKGYVLVRMPSGEVRMIHERCMATVGRVGLAEHELVKLGKAGRARWLGWRPHTRGTAMNPVDHPHGGGEGRTRGKHPESPWGWKTKGYKTRRGKKYSDQFIVTRRDGRPL MGVRKLKPVTNGTRHAVLYDFEEIEKLVRKGKEWVLLKKNQVEPEKSLLKWWHRAKGRSRQRGNITARHRGGGHKKLYRIIDFKRDKSLVPAKVVSIEYDPFRSARICLLHYADGEKRYIIWPEGLKVGDTVMSISWEDAEAGKPLPEIKPGNAMPLKYIPEGTIVHNIEFIPGKGGQIARAAGTWAQVLGRSTRKGYVLVRMPSGEVRMIHERCMATVGRVGLAEHELVKLGKAGRARWLGWRPHTRGTAMNPVDHPHGGGEGRTRGKHPESPWGW SDQFIVTRRDGRPL 2 gnl|BL_ORD_ID|25 ECs0006 hypothetical protein {Escherichia coli O157:H7 VT2-Sakai} 25 258 1 21.557 44 0.575809 194 245 18 69 1 1 13 20 52 TRKGYVLVRMPSGEVRMIHERCMATVGRVGLAEHELVKLGKAGRARWLGWRP TTTRYTLPELLDNSQQLIHEARKLTPPQISTLMRISDKLAGINAARFHDWQP T Y L + ++IHE T ++ KL AR+ W+P 3 gnl|BL_ORD_ID|19 BCE0005 DNA gyrase, B subunit (gyrB) {Bacillus cereus 10987} 19 640 1 19.631 39 2.18807 250 269 326 345 1 1 8 13 20 TAMNPVDHPHGGGEGRTRGK TAIVSIKHPNPQFEGQTKTK TA+ + HP+ EG+T+ K 4 gnl|BL_ORD_ID|23 ECs0004 threonine synthase {Escherichia coli O157:H7 VT2-Sakai} 23 428 1 19.2458 38 2.85771 199 220 153 174 1 1 6 13 22 VLVRMPSGEVRMIHERCMATVG VVILYPRGKISPLQEKLFCTLG V++ P G++ + E+ T+G 5 gnl|BL_ORD_ID|8 aq_016a ribosomal protein L22 (rplV) {Aquifex aeolicus VF5} 8 98 1 18.8606 37 3.73228 37 59 52 74 1 1 9 12 23 LKKNQVEPEKSLLKWWHRAKGRS IKKAVADDGPILKKWIPRAHGRA +KK + L KW RA GR+ 6 gnl|BL_ORD_ID|1 aq_005 elongation factor EF-Tu (tufA1) {Aquifex aeolicus VF5} 1 405 1 18.4754 36 4.87451 16 53 46 83 1 1 9 18 38 AVLYDFEEIEKLVRKGKEWVLLKKNQVEPEKSLLKWWH AKCFKYEEIDKAPEEKERGITINITHVEYETAKRHYAH A + +EEI+K + + + + VE E + + H 7 gnl|BL_ORD_ID|0 aq_001 elongation factor EF-G (fusA) {Aquifex aeolicus VF5} 0 699 1 18.4754 36 4.87451 218 261 488 534 1 1 12 21 5 48 TVGRVGLAEHELVKLGKAGRARW----LGWRPHTRGTAMNPVDHPHGG TIRKKAIGEGKFIKQ-TGGRGQYGHAIIEIEPLPRGAGFEFIDDIHGG T+ + + E + +K GR ++ + P RG +D HGG 26 8241 49 1.77658e+06 0.041 0.267 0.14 blastp blastp 2.2.10 [Oct-19-2004] ~Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, ~Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), ~"Gapped BLAST and PSI-BLAST: a new generation of protein database search~programs", Nucleic Acids Res. 25:3389-3402. /usr/home/halima/Tblast/tprotein.fdb lcl|QUERY aq_015 ribosomal protein S19 (rpsS) {Aquifex aeolicus VF5} 186 BLOSUM62 10 11 1 S 1 1 gnl|BL_ORD_ID|7 aq_015 ribosomal protein S19 (rpsS) {Aquifex aeolicus VF5} 7 186 1 369.007 946 8.25116e-106 1 186 1 186 1 1 186 186 186 MREAIKRYGSFELLKGKNTLPELEALLEERKLVLENLKKQLKEAHKGKPKIEAEGDEKLKELIREVNKAQAEVRALEIIVNRVRKYEELYAQYKQMTEKKAYVDPKLWVRIRKMNETGERKVVRTYSRATTIIPEFVGHTIAVHNGKTFVPVYITQDMVGHKLGEFAPTRTFKGHPEKTAKVVKKK MREAIKRYGSFELLKGKNTLPELEALLEERKLVLENLKKQLKEAHKGKPKIEAEGDEKLKELIREVNKAQAEVRALEIIVNRVRKYEELYAQYKQMTEKKAYVDPKLWVRIRKMNETGERKVVRTYSRATTIIPEFVGHTIAVHNGKTFVPVYITQDMVGHKLGEFAPTRTFKGHPEKTAKVVKKK MREAIKRYGSFELLKGKNTLPELEALLEERKLVLENLKKQLKEAHKGKPKIEAEGDEKLKELIREVNKAQAEVRALEIIVNRVRKYEELYAQYKQMTEKKAYVDPKLWVRIRKMNETGERKVVRTYSRATTIIPEFVGHTIAVHNGKTFVPVYITQDMVGHKLGEFAPTRTFKGHPEKTAKVVKKK 2 gnl|BL_ORD_ID|14 aq_023 N-acetylornithine aminotransferase (argD) {Aquifex aeolicus VF5} 14 376 1 23.8682 50 0.0651107 16 50 282 316 1 1 14 19 35 GKNTLPELEALLEERKLVLENLKKQLKEAHKGKPK GTVVVDEVEKLLPHVREVGNYFKEKLKELGKGKVK G + E+E LL + V K++LKE KGK K 2 18.0902 35 3.57274 43 78 288 326 1 1 13 19 3 39 EAHKGKPKIEAEGD---EKLKELIREVNKAQAEVRALEI EVEKLLPHVREVGNYFKEKLKELGKGKVKGRGLMLGLEL E K P + G+ EKLKEL + K + + LE+ 3 gnl|BL_ORD_ID|12 aq_021 3-dehydroquinate dehydratase (aroD) {Aquifex aeolicus VF5} 12 219 1 23.0978 48 0.111062 36 137 11 126 1 1 26 51 20 119 NLKKQLKEA-HKGKPKIEAEGD-----------EKLKELIREVNKAQAEVRALEIIVNRVRKYEELYAQYKQMTEKKAYVDPK-----LWVRIRKMNETGERKVVRTYSRATTIIPEFV NFSENLKKAKEKGADIVELRVDQFSDTSLNYVKEKLEEVHSQGLKTILTIRSPEEGGREVKNREELFEELSPLSD---YTDIELSSRGLLVKLYNITKEAGKKLIISYHNFELTPPNWI N + LK+A KG +E D EKL+E+ + K +R+ E V+ EEL+ + +++ Y D + L V++ + + +K++ +Y P ++ 4 gnl|BL_ORD_ID|20 BCE0006 DNA gyrase, A subunit (gyrA) {Bacillus cereus 10987} 20 852 1 21.1718 43 0.422035 22 88 421 498 1 1 19 40 11 78 ELEALLEERKLVLENLKKQ-LKEAHKGKPKIEAE------GDEKLKELIR----EVNKAQAEVRALEIIVNRVRKYEE QAQAILDMRLQRLTGLEREKIEQEYQDLMKLIAELKAILADEEKVLEIIREELTEVKERFNDKRRTEITIGGMESIED + +A+L+ R L L+++ +++ ++ K+ AE +EK+ E+IR EV + + R EI + + E+ 2 19.2458 38 1.60373 145 165 171 191 1 1 8 13 21 NGKTFVPVYITQDMVGHKLGE NGTTGIAVGMATNIPPHQLGE NG T + V + ++ H+LGE 5 gnl|BL_ORD_ID|9 aq_017 ribosomal protein S03 (rpsC) {Aquifex aeolicus VF5} 9 212 1 20.0162 40 0.940197 34 77 84 140 1 1 15 29 13 57 LENLKKQLKEAHKGK-----------PKIEAE--GDEKLKELIREVNKAQAEVRALE VENLKKTLEKMLPGKEITISVVEVRVPELDAQLVAQDIATQIERRVSHRRAMKRAID +ENLKK L++ GK P+++A+ + ++ R V+ +A RA++ 26 8241 45 997011 0.041 0.267 0.14 blastp blastp 2.2.10 [Oct-19-2004] ~Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, ~Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), ~"Gapped BLAST and PSI-BLAST: a new generation of protein database search~programs", Nucleic Acids Res. 25:3389-3402. /usr/home/halima/Tblast/tprotein.fdb lcl|QUERY aq_016a ribosomal protein L22 (rplV) {Aquifex aeolicus VF5} 98 BLOSUM62 10 11 1 S 1 1 gnl|BL_ORD_ID|8 aq_016a ribosomal protein L22 (rplV) {Aquifex aeolicus VF5} 8 98 1 178.333 451 8.83396e-49 1 88 1 88 1 1 88 88 88 MFSGKFREKTWETPFTCFAVIPKKAARIAEKVLKSVIANAEQKGLDLDRLYIKKAVADDGPILKKWIPRAHGRATMVRKRLSHITIVL MFSGKFREKTWETPFTCFAVIPKKAARIAEKVLKSVIANAEQKGLDLDRLYIKKAVADDGPILKKWIPRAHGRATMVRKRLSHITIVL MFSGKFREKTWETPFTCFAVIPKKAARIAEKVLKSVIANAEQKGLDLDRLYIKKAVADDGPILKKWIPRAHGRATMVRKRLSHITIVL 2 gnl|BL_ORD_ID|6 aq_013 ribosomal protein L02 (rplB) {Aquifex aeolicus VF5} 6 304 1 18.8606 37 0.895775 52 74 37 59 1 1 9 12 23 IKKAVADDGPILKKWIPRAHGRA LKKNQVEPEKSLLKWWHRAKGRS +KK + L KW RA GR+ 3 gnl|BL_ORD_ID|23 ECs0004 threonine synthase {Escherichia coli O157:H7 VT2-Sakai} 23 428 1 17.705 34 1.99558 6 36 316 346 1 1 7 14 31 FREKTWETPFTCFAVIPKKAARIAEKVLKSV FRRKIWQLKELGYAAVDDETTQQTMRELKEL FR K W+ +A + + + + LK + 4 gnl|BL_ORD_ID|20 BCE0006 DNA gyrase, A subunit (gyrA) {Bacillus cereus 10987} 20 852 1 15.779 29 7.58319 23 33 66 76 1 1 6 9 11 KKAARIAEKVL KKSARIVGEVI KK+ARI +V+ 5 gnl|BL_ORD_ID|16 BCE0002 DNA polymerase III, beta subunit (dnaN-1) {Bacillus cereus 10987} 16 379 1 15.3938 28 9.90395 15 33 198 216 1 1 7 9 19 FTCFAVIPKKAARIAEKVL FQANVVIPGKSLNELSKIL F VIP K+ K+L 26 8241 39 426393 0.041 0.267 0.14 blastp blastp 2.2.10 [Oct-19-2004] ~Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, ~Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), ~"Gapped BLAST and PSI-BLAST: a new generation of protein database search~programs", Nucleic Acids Res. 25:3389-3402. /usr/home/halima/Tblast/tprotein.fdb lcl|QUERY aq_017 ribosomal protein S03 (rpsC) {Aquifex aeolicus VF5} 212 BLOSUM62 10 11 1 S 1 1 gnl|BL_ORD_ID|9 aq_017 ribosomal protein S03 (rpsC) {Aquifex aeolicus VF5} 9 212 1 388.267 996 1.5416e-111 1 212 1 212 1 1 197 197 212 MGQKTHPIGFRLGVIKEWPSKWYAPKKEYSKLLHEDLKIKNYIKERYKVAGVSKVEIERIVDKVRVKIHTARPAIVIGRRGQEVENLKKTLEKMLPGKEITISVVEVRVPELDAQLVAQDIATQIERRVSHRRAMKRAIDNXXXXXXXXXXXXXXXRIGGAELARKEWFLVGRMPLQTLRADIDYGFATAYTKYGILSVKVWIYKGDVLNGR MGQKTHPIGFRLGVIKEWPSKWYAPKKEYSKLLHEDLKIKNYIKERYKVAGVSKVEIERIVDKVRVKIHTARPAIVIGRRGQEVENLKKTLEKMLPGKEITISVVEVRVPELDAQLVAQDIATQIERRVSHRRAMKRAIDNALKAGAKGVKVQVKGRIGGAELARKEWFLVGRMPLQTLRADIDYGFATAYTKYGILSVKVWIYKGDVLNGR MGQKTHPIGFRLGVIKEWPSKWYAPKKEYSKLLHEDLKIKNYIKERYKVAGVSKVEIERIVDKVRVKIHTARPAIVIGRRGQEVENLKKTLEKMLPGKEITISVVEVRVPELDAQLVAQDIATQIERRVSHRRAMKRAIDN RIGGAELARKEWFLVGRMPLQTLRADIDYGFATAYTKYGILSVKVWIYKGDVLNGR 2 gnl|BL_ORD_ID|23 ECs0004 threonine synthase {Escherichia coli O157:H7 VT2-Sakai} 23 428 1 25.0238 53 0.0342824 159 203 110 155 1 1 17 24 1 46 GGAELARKEWFLVGRMPLQTLRADI-DYGFATAYTKYGILSVKVWI GGRFMAQMLTHIAGDKPVTILTATSGDTGAAVAHAFYGLPNVKVVI GG +A+ + G P+ L A D G A A+ YG+ +VKV I 3 gnl|BL_ORD_ID|14 aq_023 N-acetylornithine aminotransferase (argD) {Aquifex aeolicus VF5} 14 376 1 24.6386 52 0.0447743 28 56 288 316 1 1 12 16 29 EYSKLLHEDLKIKNYIKERYKVAGVSKVE EVEKLLPHVREVGNYFKEKLKELGKGKVK E KLL ++ NY KE+ K G KV+ 4 gnl|BL_ORD_ID|0 aq_001 elongation factor EF-G (fusA) {Aquifex aeolicus VF5} 0 699 1 21.1718 43 0.495037 88 138 546 599 1 1 17 26 3 54 KKTLEKMLPGKEITISVVEVRVPELDA---QLVAQDIATQIERRVSHRRAMKRA KGVKEAMQNGILAGYPVVDVRVRLFDGSYHEVDSSDIAFQVAGSLAFKDAAKKA K E M G VV+VRV D ++ + DIA Q+ ++ + A K+A 2 19.631 39 1.44034 84 102 224 242 1 1 9 13 19 VENLKKTLEKMLPGKEITI VETDDELMEKYLEGQEISI VE + +EK L G+EI+I 5 gnl|BL_ORD_ID|7 aq_015 ribosomal protein S19 (rpsS) {Aquifex aeolicus VF5} 7 186 1 20.0162 40 1.10283 84 140 34 77 1 1 15 29 13 57 VENLKKTLEKMLPGKEITISVVEVRVPELDAQLVAQDIATQIERRVSHRRAMKRAID LENLKKQLKEAHKGK-----------PKIEAE--GDEKLKELIREVNKAQAEVRALE +ENLKK L++ GK P+++A+ + ++ R V+ +A RA++ 6 gnl|BL_ORD_ID|12 aq_021 3-dehydroquinate dehydratase (aroD) {Aquifex aeolicus VF5} 12 219 1 18.8606 37 2.45684 81 101 67 87 1 1 7 14 21 GQEVENLKKTLEKMLPGKEIT GREVKNREELFEELSPLSDYT G+EV+N ++ E++ P + T 7 gnl|BL_ORD_ID|20 BCE0006 DNA gyrase, A subunit (gyrA) {Bacillus cereus 10987} 20 852 1 18.0902 35 4.19074 46 62 123 139 1 1 8 11 17 RYKVAGVSKVEIERIVD RYTEARMSKISMELIRD RY A +SK+ +E I D 8 gnl|BL_ORD_ID|2 aq_008 ribosomal protein S10 (rpsJ) {Aquifex aeolicus VF5} 2 104 1 17.3198 33 7.14832 62 90 4 32 1 1 7 16 29 DKVRVKIHTARPAIVIGRRGQEVENLKKT EKIRIKLRAYDHRLLDQSVKQIIETVKRT +K+R+K+ ++ Q +E +K+T 26 8241 46 1.16947e+06 0.041 0.267 0.14 blastp blastp 2.2.10 [Oct-19-2004] ~Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, ~Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), ~"Gapped BLAST and PSI-BLAST: a new generation of protein database search~programs", Nucleic Acids Res. 25:3389-3402. /usr/home/halima/Tblast/tprotein.fdb lcl|QUERY aq_018 ribosomal protein L16 (rplP) {Aquifex aeolicus VF5} 142 BLOSUM62 10 11 1 S 1 1 gnl|BL_ORD_ID|10 aq_018 ribosomal protein L16 (rplP) {Aquifex aeolicus VF5} 10 142 1 289.656 740 4.49965e-82 1 142 1 142 1 1 142 142 142 MYLQPKKVRWRKQRRGTLKGKAFRGNKLAFGEYGIQALDRAWITQQQIEAVRVALVRSLKKGAKVWIRIFPDKPYTKKPNEVRMGGGKGDPEGFVAVVKPGRILFEFTGVPEEVAQEAFTIAASKLPIPVRLVKYGEFTFKY MYLQPKKVRWRKQRRGTLKGKAFRGNKLAFGEYGIQALDRAWITQQQIEAVRVALVRSLKKGAKVWIRIFPDKPYTKKPNEVRMGGGKGDPEGFVAVVKPGRILFEFTGVPEEVAQEAFTIAASKLPIPVRLVKYGEFTFKY MYLQPKKVRWRKQRRGTLKGKAFRGNKLAFGEYGIQALDRAWITQQQIEAVRVALVRSLKKGAKVWIRIFPDKPYTKKPNEVRMGGGKGDPEGFVAVVKPGRILFEFTGVPEEVAQEAFTIAASKLPIPVRLVKYGEFTFKY 2 gnl|BL_ORD_ID|0 aq_001 elongation factor EF-G (fusA) {Aquifex aeolicus VF5} 0 699 1 20.7866 42 0.389856 34 114 115 201 1 1 22 39 6 87 GIQALDRA-WITQQQIEAVRVALVRSLKKGAKVWIRIFP--DKPYTKKPNEVRMGGGKGDP-EGFVAV--VKPGRILFEFTGVPEEV GVQPQSEANWRWADRFQVPRIAFINKMDRLGADFYRVFKEIEEKLTIKPVAIQIPLGAEDQFEGVIDLMEMKAIRWLEETLGAKYEV G+Q A W + + R+A + + + + R+F ++ T KP +++ G D EG + + +K R L E G EV 3 gnl|BL_ORD_ID|21 ECs0002 aspartokinase I-homoserine dehydrogenase I {Escherichia coli O157:H7 VT2-Sakai} 21 820 1 17.705 34 3.30032 113 127 166 180 1 1 6 11 15 EVAQEAFTIAASKLP DIAESTRRIAASRIP ++A+ IAAS++P 2 16.1642 30 9.60248 67 110 592 635 1 1 10 19 44 IRIFPDKPYTKKPNEVRMGGGKGDPEGFVAVVKPGRILFEFTGV LRHAAEKSRRKFLYDTNVGAGLPVIENLQNLLNAGDELMKFSGI +R +K K + +G G E ++ G L +F+G+ 4 gnl|BL_ORD_ID|20 BCE0006 DNA gyrase, A subunit (gyrA) {Bacillus cereus 10987} 20 852 1 17.705 34 3.30032 69 97 59 87 1 1 12 12 29 IFPDKPYTKKPNEVRMGGGKGDPEGFVAV ITADKAYKKSARIVGEVIGKYHPHGDSAV I DK Y K V GK P G AV 2 16.1642 30 9.60248 17 33 562 578 1 1 7 8 17 TLKGKAFRGNKLAFGEY TNKGKVYRTKGYEIPEY T KGK +R EY 5 gnl|BL_ORD_ID|23 ECs0004 threonine synthase {Escherichia coli O157:H7 VT2-Sakai} 23 428 1 16.9346 32 5.6295 23 34 99 110 1 1 6 8 12 FRGNKLAFGEYG FHGPTLAFKDFG F G LAF ++G 6 gnl|BL_ORD_ID|4 aq_011 ribosomal protein L04 (rplD) {Aquifex aeolicus VF5} 4 199 1 16.5494 31 7.35236 73 111 123 162 1 1 11 18 1 40 KPYTKKPNEVRMGGGKGDPEGFVAVVKPGRILFE-FTGVP KPKTKKAIEFLKNLGVEKEKVLVVIPEKADVLYKSFRNLP KP TKK E G + V + + +L++ F +P 7 gnl|BL_ORD_ID|3 aq_009 ribosomal protein L03 (rplC) {Aquifex aeolicus VF5} 3 241 1 16.5494 31 7.35236 30 42 70 82 1 1 5 8 13 FGEYGIQALDRAW FKKHGVPLLRRLW F ++G+ L R W 8 gnl|BL_ORD_ID|7 aq_015 ribosomal protein S19 (rpsS) {Aquifex aeolicus VF5} 7 186 1 16.1642 30 9.60248 88 99 173 184 1 1 7 7 12 KGDPEGFVAVVK KGHPEKTAKVVK KG PE VVK 9 gnl|BL_ORD_ID|6 aq_013 ribosomal protein L02 (rplB) {Aquifex aeolicus VF5} 6 304 1 16.1642 30 9.60248 10 17 243 250 1 1 5 5 8 WRKQRRGT WRPHTRGT WR RGT 26 8241 43 705177 0.041 0.267 0.14 blastp blastp 2.2.10 [Oct-19-2004] ~Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, ~Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), ~"Gapped BLAST and PSI-BLAST: a new generation of protein database search~programs", Nucleic Acids Res. 25:3389-3402. /usr/home/halima/Tblast/tprotein.fdb lcl|QUERY aq_020 ribosomal protein S17 (rpsQ) {Aquifex aeolicus VF5} 107 BLOSUM62 10 11 1 S 1 1 gnl|BL_ORD_ID|11 aq_020 ribosomal protein S17 (rpsQ) {Aquifex aeolicus VF5} 11 107 1 156.377 394 4.06762e-42 1 94 1 94 1 1 75 75 94 MTEQKQQKKWHEKRKHLVGXXXXXXXXXXXXXXXXXXXPHPIYGKHIIKSKKYHAHDEHNECRVGDIVMIRETRPLSKTKRWVVVKILQRARRP MTEQKQQKKWHEKRKHLVGVVVSDKMDKTVVVKVDRKVPHPIYGKHIIKSKKYHAHDEHNECRVGDIVMIRETRPLSKTKRWVVVKILQRARRP MTEQKQQKKWHEKRKHLVG PHPIYGKHIIKSKKYHAHDEHNECRVGDIVMIRETRPLSKTKRWVVVKILQRARRP 2 gnl|BL_ORD_ID|16 BCE0002 DNA polymerase III, beta subunit (dnaN-1) {Bacillus cereus 10987} 16 379 1 16.5494 31 5.03032 68 84 153 169 1 1 7 8 17 VMIRETRPLSKTKRWVV VSTSETRPILTGVNWKV V ETRP+ W V 3 gnl|BL_ORD_ID|21 ECs0002 aspartokinase I-homoserine dehydrogenase I {Escherichia coli O157:H7 VT2-Sakai} 21 820 1 15.779 29 8.58043 75 88 389 402 1 1 4 10 14 PLSKTKRWVVVKIL PLAVTERLAIISVV PL+ T+R ++ ++ 26 8241 40 482467 0.041 0.267 0.14 blastp blastp 2.2.10 [Oct-19-2004] ~Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, ~Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), ~"Gapped BLAST and PSI-BLAST: a new generation of protein database search~programs", Nucleic Acids Res. 25:3389-3402. /usr/home/halima/Tblast/tprotein.fdb lcl|QUERY aq_021 3-dehydroquinate dehydratase (aroD) {Aquifex aeolicus VF5} 219 BLOSUM62 10 11 1 S 1 1 gnl|BL_ORD_ID|12 aq_021 3-dehydroquinate dehydratase (aroD) {Aquifex aeolicus VF5} 12 219 1 431.409 1108 1.65489e-124 1 219 1 219 1 1 219 219 219 MLIAVPLDDTNFSENLKKAKEKGADIVELRVDQFSDTSLNYVKEKLEEVHSQGLKTILTIRSPEEGGREVKNREELFEELSPLSDYTDIELSSRGLLVKLYNITKEAGKKLIISYHNFELTPPNWIIREVLREGYRYGGIPKIAVKANSYEDVARLLCISRQVEGEKILISMGDYGKISRLAGYVFGSVITYCSLEKAFAPGQIPLEEMVELRKKFYRL MLIAVPLDDTNFSENLKKAKEKGADIVELRVDQFSDTSLNYVKEKLEEVHSQGLKTILTIRSPEEGGREVKNREELFEELSPLSDYTDIELSSRGLLVKLYNITKEAGKKLIISYHNFELTPPNWIIREVLREGYRYGGIPKIAVKANSYEDVARLLCISRQVEGEKILISMGDYGKISRLAGYVFGSVITYCSLEKAFAPGQIPLEEMVELRKKFYRL MLIAVPLDDTNFSENLKKAKEKGADIVELRVDQFSDTSLNYVKEKLEEVHSQGLKTILTIRSPEEGGREVKNREELFEELSPLSDYTDIELSSRGLLVKLYNITKEAGKKLIISYHNFELTPPNWIIREVLREGYRYGGIPKIAVKANSYEDVARLLCISRQVEGEKILISMGDYGKISRLAGYVFGSVITYCSLEKAFAPGQIPLEEMVELRKKFYRL 2 gnl|BL_ORD_ID|7 aq_015 ribosomal protein S19 (rpsS) {Aquifex aeolicus VF5} 7 186 1 23.0978 48 0.135767 14 126 35 137 1 1 27 51 22 119 ENLKKAKE---KGADIVELRVDQFSDTSLNYVKEKLEEVHSQGLKTILTIRSPEEGGREVKNREELFEELSPLSD---YTDIELSSRGLLVKLYNITKEAGKKLIISYHNFELTPPNWI ENLKKQLKEAHKGKPKIEAEGD-----------EKLKELIREVNKAQAEVRALEIIVNRVRKYEELYAQYKQMTEKKAYVDPK-----LWVRIRKMNETGERKVVRTYSRATTIIPEFV ENLKK + KG +E D EKL+E+ + K +R+ E V+ EEL+ + +++ Y D + L V++ + + +K++ +Y P ++ 3 gnl|BL_ORD_ID|15 BCE0001 chromosomal replication initiator protein DnaA (dnaA) {Bacillus cereus 10987} 15 446 1 20.0162 40 1.14933 55 97 38 80 1 1 15 23 4 45 KTILTIRSPEEGGRE--VKNREELFEELSPLSDYTDIELSSRGLL KDVLTITAPNEFARDWLESHYSELISE--TLYDLTGAKLAIRFII K +LTI +P E R+ + EL E L D T +L+ R ++ 2 18.0902 35 4.36746 3 26 273 296 1 1 10 13 24 IAVPLDDTNFSENLKKAKEKGADI ITPPDLETRIAILRKKAKAEGLDI I P +T + KKAK +G DI 4 gnl|BL_ORD_ID|19 BCE0005 DNA gyrase, B subunit (gyrB) {Bacillus cereus 10987} 19 640 1 19.2458 38 1.96047 17 83 375 452 1 1 18 25 11 78 KKAKEKGADIVELRVDQFSDTSLNYVKEKLEEVHSQG-----------LKTILTIRSPEEGGREVKNREELFEELSPL RKIVEKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPL +K EKG RV L K LE G + I + GG + R+ F+ + PL 5 gnl|BL_ORD_ID|14 aq_023 N-acetylornithine aminotransferase (argD) {Aquifex aeolicus VF5} 14 376 1 19.2458 38 1.96047 40 49 301 310 1 1 7 9 10 NYVKEKLEEV NYFKEKLKEL NY KEKL+E+ 6 gnl|BL_ORD_ID|9 aq_017 ribosomal protein S03 (rpsC) {Aquifex aeolicus VF5} 9 212 1 18.8606 37 2.56045 67 87 81 101 1 1 7 14 21 GREVKNREELFEELSPLSDYT GQEVENLKKTLEKMLPGKEIT G+EV+N ++ E++ P + T 7 gnl|BL_ORD_ID|23 ECs0004 threonine synthase {Escherichia coli O157:H7 VT2-Sakai} 23 428 1 16.9346 32 9.72969 34 66 106 138 1 1 9 14 33 FSDTSLNYVKEKLEEVHSQGLKTILTIRSPEEG FKDFGGRFMAQMLTHIAGDKPVTILTATSGDTG F D ++ + L + TILT S + G 26 8241 46 1.21878e+06 0.041 0.267 0.14 blastp blastp 2.2.10 [Oct-19-2004] ~Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, ~Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), ~"Gapped BLAST and PSI-BLAST: a new generation of protein database search~programs", Nucleic Acids Res. 25:3389-3402. /usr/home/halima/Tblast/tprotein.fdb lcl|QUERY aq_022 putative protein {Aquifex aeolicus VF5} 166 BLOSUM62 10 11 1 S 1 1 gnl|BL_ORD_ID|13 aq_022 putative protein {Aquifex aeolicus VF5} 13 166 1 301.597 771 1.40495e-85 1 166 1 166 1 1 152 152 166 MYALLVISLYLQRFYNXXXXXXXXXXXXXXFQDEKSLGFKNFKKGLTYGSLFLPFSVPYLLSAQCYALVLNQLGIALAEEIFFRGFLMQKFSNFTVSLMSTSAHLAYWANLNALLTFFPSLFFGWLYRKTDSVIAPAFAHFSANMFYFFFIERFPELGELLQRSLI MYALLVISLYLQRFYNLSIIPQLILLSPLLFQDEKSLGFKNFKKGLTYGSLFLPFSVPYLLSAQCYALVLNQLGIALAEEIFFRGFLMQKFSNFTVSLMSTSAHLAYWANLNALLTFFPSLFFGWLYRKTDSVIAPAFAHFSANMFYFFFIERFPELGELLQRSLI MYALLVISLYLQRFYN FQDEKSLGFKNFKKGLTYGSLFLPFSVPYLLSAQCYALVLNQLGIALAEEIFFRGFLMQKFSNFTVSLMSTSAHLAYWANLNALLTFFPSLFFGWLYRKTDSVIAPAFAHFSANMFYFFFIERFPELGELLQRSLI 2 gnl|BL_ORD_ID|14 aq_023 N-acetylornithine aminotransferase (argD) {Aquifex aeolicus VF5} 14 376 1 20.7866 42 0.478674 35 51 120 136 1 1 9 11 17 KSLGFKNFKKGLTYGSL KFISFENSFHGRTYGSL K + F+N G TYGSL 26 8241 44 865834 0.041 0.267 0.14 blastp blastp 2.2.10 [Oct-19-2004] ~Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, ~Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), ~"Gapped BLAST and PSI-BLAST: a new generation of protein database search~programs", Nucleic Acids Res. 25:3389-3402. /usr/home/halima/Tblast/tprotein.fdb lcl|QUERY aq_023 N-acetylornithine aminotransferase (argD) {Aquifex aeolicus VF5} 376 BLOSUM62 10 11 1 S 1 1 gnl|BL_ORD_ID|14 aq_023 N-acetylornithine aminotransferase (argD) {Aquifex aeolicus VF5} 14 376 1 674.085 1738 0 1 376 1 376 1 1 339 339 376 MTYLMNNYARLPVKFVRGKGVYLYDEEGKEYLDFVSGIGVNSLGHAYPKLTEALKEQVEKLLHVSNLYENPWQEELAHKLVKHFWTEGKVFFANSGTESVEAAIKLARKYWRDKGKNKWKFISFENSFHGRTYGSLSATGQPKFHKGFEPLVPGFSYAKLNDIDSVYKLLDEETAXXXXXXXXXXXXXNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGEFYAYQHFNLKPDVIALAKGLGGGVPIGAILAREEVAQSFTPGSHGSTFGGNPLACRAGTVVVDEVEKLLPHVREVGNYFKEXXXXXXXXXXXXXXXXXXXXXXXXCKDYVLKALEKGLLINCTAGKVLRFLPPLIIQKEHIDRAISVLREIL MTYLMNNYARLPVKFVRGKGVYLYDEEGKEYLDFVSGIGVNSLGHAYPKLTEALKEQVEKLLHVSNLYENPWQEELAHKLVKHFWTEGKVFFANSGTESVEAAIKLARKYWRDKGKNKWKFISFENSFHGRTYGSLSATGQPKFHKGFEPLVPGFSYAKLNDIDSVYKLLDEETAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGEFYAYQHFNLKPDVIALAKGLGGGVPIGAILAREEVAQSFTPGSHGSTFGGNPLACRAGTVVVDEVEKLLPHVREVGNYFKEKLKELGKGKVKGRGLMLGLELERECKDYVLKALEKGLLINCTAGKVLRFLPPLIIQKEHIDRAISVLREIL MTYLMNNYARLPVKFVRGKGVYLYDEEGKEYLDFVSGIGVNSLGHAYPKLTEALKEQVEKLLHVSNLYENPWQEELAHKLVKHFWTEGKVFFANSGTESVEAAIKLARKYWRDKGKNKWKFISFENSFHGRTYGSLSATGQPKFHKGFEPLVPGFSYAKLNDIDSVYKLLDEETA NEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGEFYAYQHFNLKPDVIALAKGLGGGVPIGAILAREEVAQSFTPGSHGSTFGGNPLACRAGTVVVDEVEKLLPHVREVGNYFKE CKDYVLKALEKGLLINCTAGKVLRFLPPLIIQKEHIDRAISVLREIL 2 gnl|BL_ORD_ID|13 aq_022 putative protein {Aquifex aeolicus VF5} 13 166 1 20.7866 42 1.24246 120 136 35 51 1 1 9 11 17 KFISFENSFHGRTYGSL KSLGFKNFKKGLTYGSL K + F+N G TYGSL 3 gnl|BL_ORD_ID|21 ECs0002 aspartokinase I-homoserine dehydrogenase I {Escherichia coli O157:H7 VT2-Sakai} 21 820 1 19.2458 38 3.61499 61 77 510 526 1 1 9 10 17 LLHVSNLYENPWQEELA LTNVHGLNLENWQEELA L +V L WQEELA 4 gnl|BL_ORD_ID|9 aq_017 ribosomal protein S03 (rpsC) {Aquifex aeolicus VF5} 9 212 1 18.0902 35 8.05337 288 305 28 45 1 1 8 10 18 EVEKLLPHVREVGNYFKE EYSKLLHEDLKIKNYIKE E KLL ++ NY KE 26 8241 51 2.24738e+06 0.041 0.267 0.14