[Biopython] Any CATHDB users (protein domain database)?

Peter Cock p.j.a.cock at googlemail.com
Wed Jun 21 13:13:28 UTC 2017


Thanks Stéphane,

That would be much appreciated - and thank you for your patience Saket,

Peter

On Wed, Jun 21, 2017 at 12:56 PM, Téletchéa Stéphane
<stephane.teletchea at univ-nantes.fr> wrote:
> Le 26/05/2017 à 11:34, Peter Cock a écrit :
>>
>> Hello all,
>>
>> Are any of you CATHDB users? I'd like someone to test
>> and review this pull request from Saket for accessing
>> their web API:
>>
>> https://github.com/biopython/biopython/pull/1258
>>
>> See also http://www.cathdb.info/
>>
>> Thanks,
>>
>> Peter
>
>
> Dear Peter,
>
> I use CATH and I have also some code for accessing CATH entries in another
> project (not accessible yet, though), I can give a try to this code, any
> "executive summary" for pulling this branches and test/report, I have
> unfortunately not a lot of time to dedicate to tests :-)
>
> Best,
>
> Stéphane
>
> --
> Assistant Professor in BioInformatics, UFIP, UMR 6286 CNRS, Team Protein
> Design In Silico
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