[Biopython] parsing gff3 sequence

Peter Cock p.j.a.cock at googlemail.com
Mon Jun 1 11:21:31 UTC 2015


Hello again Atteyet-Alla,

Your original email was delayed for moderation due to the attachment,
but I replied to it recently:

http://mailman.open-bio.org/pipermail/biopython/2015-June/015642.html

Peter

On Mon, Jun 1, 2015 at 11:08 AM,  <Atteyet-Alla.Yassin at ukb.uni-bonn.de> wrote:
> I obtained the attached gff3 file using bioperl from a Genbank format and
> want to use it to build chromosome map with circos. I have no experience
> with biopython and want to know: the steps to parse it and the linux command
> which should I use?
>
> (See attached file: pptre.gff)
>
>
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