[Biopython] Finding genes with KEGG module

Fields, Christopher J cjfields at illinois.edu
Tue Jan 13 00:25:40 UTC 2015


The REST api is still free but is constrained per IP address if I recall.  To get local databases using the latest, KEGG requires a subscription (ain't cheap).

Chris

On Jan 12, 2015, at 6:08 PM, Radhouane Aniba <aradwen at gmail.com<mailto:aradwen at gmail.com>> wrote:

As far as I know, KEGG is not free, whatever package you'll use you'll have to make sure you're using the last version of it ( I mean KEGG)

On Mon, Jan 12, 2015 at 9:30 AM, Björn Johansson <bjorn_johansson at bio.uminho.pt<mailto:bjorn_johansson at bio.uminho.pt>> wrote:
Hi,
I am interested in starting working with KEGG. I wonder if the Bio.KEGG module could be used to find all genes that encode enzymes that catalyze a specific reaction? Is there any tutorial on the module?

Thank you!
Bjorn Johansson








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Radhouane Aniba
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