[Biopython] Filter Blast results

[Peter Cock]

On Tue, Feb 26, 2013 at 4:45 PM, Justin Gibbons <jgibbons1 at mail.usf.edu> wrote:
> I know that there is already a script in the Cookbook for filtering out
> blast queries with no hits, but it involves holding all of the sequence
> objects in memory, which isn't good if you have to work with a lot of
> sequences.

Hi Justin,

Which example are you referring too? It doesn't sound very efficient.

There are some wiki pages with user contributed cookbook recipes:
http://biopython.org/wiki/Category:Cookbook

There is also the "Biopython Tutorial and Cookbook", online here:
http://biopython.org/DIST/docs/tutorial/Tutorial.html
http://biopython.org/DIST/docs/tutorial/Tutorial.pdf

Thanks,

Peter