[Biopython] question on installation of BioPython on Mac OS 10.7
schnoes at gmail.com
Mon Feb 27 22:50:36 UTC 2012
It sounds like you might be new to Mac/OS 10... an easy way to ease into
that is to use a package manager (or if you're like me and just like to
keep everything organized with a manager and don't always feel like self
compiling). I have used a couple of different ones. I am currently using
MacPorts (http://www.macports.org/) and they keep very up to date (just
upgraded my biopython to 1.59 today). Fink (http://www.finkproject.org/)
and Homebrew (http://mxcl.github.com/homebrew/) are two other commonly
used/ well known managers.
On Mon, Feb 27, 2012 at 2:37 PM, Peter Cock <p.j.a.cock at googlemail.com>wrote:
> On Monday, February 27, 2012, Daria Fedyukina wrote:
> > Hello,
> > I am trying to install BioPython 1.58. My BioPython and python are both
> > the Applications folder.
> > My configuration is:
> > OS: Mac OS 10.7.3
> > Python: 2.7.2
> > Apple Xcode is installed.
> > NumPy is not installed (could not install for 2.7, only available for
> > decided to skip)
> What version of Xcode do you have, and were there any options when you
> installed about SDK installation and command line tool installation? It
> worked for me on one of my machines which has Mac OS X 10.7 Lion, but I am
> not in front of it right now to check the details.
> Biopython mailing list - Biopython at lists.open-bio.org
Alexandra Schnoes, Ph.D.
Scientist, Babbitt Laboratory
Program Coordinator, Graduate Student Internships for Career Exploration
University of California San Francisco
Email: schnoes at gmail.com
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