[Biopython] Installation of BCBio pack

Brad Chapman chapmanb at 50mail.com
Tue Apr 3 13:11:13 UTC 2012


Ivaylo;

> I would like to use the nice GFF parser tool from BCBio pack, but I am not
> sure how to install the pack on my machine. If someone could help me to
> install BCBio on Ubuntu 11.10 I would be so grateful. Thank you in
> advance.

We're hoping to include this in the next release of Biopython. In the
meantime it's a manual install:

git clone git://github.com/chapmanb/bcbb.git
cd bcbb/gff
python setup.py build
sudo python setup.py install

Hope this helps,
Brad



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