[Biopython] Serialize SeqRecord to JSON?

Uri Laserson laserson at mit.edu
Tue Jun 28 04:26:50 UTC 2011


I am interested in easily loading SeqRecords into MongoDB, including all
annotations/features.

I made a hack where I convert everything to python dict and list types, and
back.  If anyone is interested, they can find it on my github page:

http://goo.gl/b3bts

It's worked well for me thus far.

Uri

...................................................................................
Uri Laserson
Graduate Student, Biomedical Engineering
Harvard-MIT Division of Health Sciences and Technology
M +1 917 742 8019
laserson at mit.edu



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