[Biopython] missing dtd in Bio.Entrez

Guy Eakin guyeakin at gmail.com
Wed Jun 1 08:33:55 UTC 2011


Well, I suppose that explains it.  version 1.54 is what I am using.  I
downloaded it from the Ubuntu software center earlier tonight. I had
just assumed that was most recent. Sorry for the red herring.

guy

On Wed, Jun 1, 2011 at 3:43 AM, Peter Cock <p.j.a.cock at googlemail.com> wrote:
> Hi Guy,
>
> You have to have subscribed to the mailing list in order
> to post to it - sadly this became necessary due to spam.
>
> Thank you for your email, but could you give a little more
> detail. Which version of Biopython do you have? Use:
>
> import Bio
> print Bio.__version__
>
> The DTD file pubmed_110101.dtd was added to our
> repository in September 2010, so should have been in
> Biopython 1.56 and 1.57:-
>
> https://github.com/biopython/biopython/commit/9ea066c5de4e8d64d16f2774bed78e0b69777b8a#Bio/Entrez/DTDs/pubmed_110101.dtd
>
> Regards,
>
> Peter
>
> On Wed, Jun 1, 2011 at 5:32 AM, Guy Eakin <guyeakin at gmail.com> wrote:
>> ---------- Forwarded message ----------
>> From: Guy Eakin <guyeakin at gmail.com>
>> To: biopython-dev at biopython.org
>> Date: Wed, 1 Jun 2011 00:27:15 -0400
>> Subject: missing dtd in Bio.Entrez
>> http://eutils.ncbi.nlm.nih.gov/corehtml/query/DTD/pubmed_110101.dtd
>>
>> The above is missing from the current biopython distribution. The
>> error message requests that this email address be notified.
>>
>> Thanks,
>> Guy Eakin
>>
>>
>




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