[Biopython] Wrong instance length bug in MEME parser

Bartek Wilczynski bartek at rezolwenta.eu.org
Fri Sep 3 14:52:32 UTC 2010


On Fri, Sep 3, 2010 at 3:11 PM, John Reid <j.reid at mail.cryst.bbk.ac.uk>wrote:

> Hi,
>
> The MEME parser in biopython 1.55 seems to incorrectly set the length of
> the first instance of a motif to 0. Here is an example:
>
> /cut/
Hi,

Thanks for reporting the bug. It is fixed now in the main branch (small
change, you can see the diff here :
http://github.com/biopython/biopython/commit/102ad30a8c5d8bd87847000b33f771b40143e743

I'm closing the bug now, if you find anything else, please let us know.

thanks
Bartek



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