[Biopython] Remove hydrogens...

Peter biopython at maubp.freeserve.co.uk
Tue Jan 5 12:20:18 EST 2010


2009/12/29 Yasser Almeida Hernández <pedro.al at fenhi.uh.cu>:
> Hi all...
> How can i remove hydrogens atoms from the structures objects?
>
> Thanks
>
> --
> Lic. Yasser Almeida Hernández

Hi,

I would suggest you look at pages 5 and 6 of the Bio.PDB
documentation, the bit on the Select class:
http://biopython.org/DIST/docs/cookbook/biopdb_faq.pdf

See also related discussions on the mailing list:
http://lists.open-bio.org/pipermail/biopython/2009-March/005021.html
http://lists.open-bio.org/pipermail/biopython/2009-May/005172.html

Please let us know how you get on. If you would like to
contribute to the project, this seems like an excellent topic
for a cookbook entry, once you've got it working of course ;)

http://biopython.org/wiki/Category:Cookbook

Peter



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