[Biopython] How to get sequences upstream of TSS of genes?

Peng Yu pengyu.ut at gmail.com
Thu Oct 15 21:17:26 UTC 2009


I have a set of genes. I want to get the 5kb sequence that is upstream
of the TSS's of each gene.

I have the following specific questions. Could somebody help me? Thank you!

Which database I can access to get mouse genome?
Give a gene name what function I should call to get the gene's location?



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