[Biopython] [Biopython-dev] biopython

Peter biopython at maubp.freeserve.co.uk
Wed Jun 24 09:43:51 UTC 2009


On Tue, Jun 23, 2009 at 5:12 AM, <amrita at iisermohali.ac.in> wrote:
>
> Dear all,
>
> I want to know whether its possible or not to extract chemical shift
> information about protein from BMRB (BioMagResBank) or Ref-DB
> (referenced databank) using biopython programming.
>
> Amrita Kumari

I'd replied to Amrita directly, and suggested he email the discussion
list in case anyone had any suggestions. I don't think there is
anything already included with Biopython for chemical shifts from
BMRB (BioMagResBank) or Ref-DB (referenced databank), but I
don't work with NMR or 3D structures.

http://www.bmrb.wisc.edu/ - BioMagResBank
http://redpoll.pharmacy.ualberta.ca/RefDB/ - Ref-DB

Any ideas?

Peter



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