[BioPython] retrieve sequence coordinates of exons for a stretch of genes

Kevin Lam ULNJUJERYDIX at spammotel.com
Thu Feb 14 06:02:18 UTC 2008


Hi
I have been scouring through the web for something I thought was a rather
simple task but I can't find the answer.

How do I get the sequence coordinates for exons of genes in a stretch of
genome demarcated by say HoxA13 and Hox A1 ?

below is the example of the data I am looking for.

1026087..1026688    1026807..1026834    1026839..1027045    HOXD12
1033641..1034421    1035192..1035427    1035428..1035873    HOXD11



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