[BioPython] KEGG Gene parser

[Renato Alves]

Both.

I got that one via KEGG API but you can get them at 
ftp://ftp.genome.jp/pub/kegg/genes/ .
In the organisms folder you have full genome files (*.ent) in KEGG format.

Renato

Quoting Peter on 12/12/2008 06:28 PM:
> On Fri, Dec 12, 2008 at 6:08 PM, Renato Alves <rjalves at igc.gulbenkian.pt> wrote:
>   
>> At the moment I'm doing exactly that, getting the sequence out of gene files
>> like the one attached.
>>     
>
> When you say sequence, do you want the nucleotides or the protein (or both)?
>
> Is there a URL for where that example file came from?  I'd like to
> have a look at similar examples etc but all I found so far on KEGG
> were the HTML equivalents to this data.
>
> Thanks
>
> Peter
>