[BioPython] OBO format parser and genome databasing

Peter biopython at maubp.freeserve.co.uk
Thu Jun 28 08:38:00 UTC 2007


Sean Davis wrote:
> Does anyone know of an OBO format parser for python?

This is the replacement for the older GO flat file format, right?

> As a more general question, is anyone using the chado database schema
> with python?

I haven't.

> Is there a similar project to chado/gmod but python-based?  How about
> a microarray (MAGE-type) database system that is python-based?

Sorry Sean, I don't know of such a project.

Peter




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