[BioPython] EMBL parsing in Biopython 1.43

[Peter]

Peter wrote:
> Michiel de Hoon wrote:
>> Do you have an idea as to what may be going wrong here?
> 
> Yes - I wrote and EMBL parser using the latest file format, while I 
> suspect your file from the Pasteur Institute uses an older format - 
> specifically one where the first list (the ID line) has a different 
> number of fields.

The file you tried seems to use the pre 2006 style ID line.  I found 
another example like this on the BioPerl webpage.  See also:

http://www.ebi.ac.uk/embl/Documentation/archivedchanges.html

> I hope to have a fix in CVS today/tomorrow.

I have updated Bio/GenBank/Scanner.py to cope with these old EMBL ID 
lines and added another EMBL test case to test_SeqIO.py

Your example now parses fine, giving a single SeqRecord as expected.  I 
have not checked the annotation or features...

Peter