[BioPython] Running Blast locally

[Christof Winter]

Dear Manickam,

Can you try
blastall -V T -d db/swissprot -i /home/manickam/Documents/m_cold.fasta -p blastp

instead?

Christof


Muthuraman, Manickam wrote:
> Dear peter
> 
> In the last mail i said that b_record is none , so i tried to run the blastall in my local computer and it works right now.
> 
> here is the command :
> ./blastall -d db/swissprot -i /home/manickam/Documents/m_cold.fasta -p blastp 
>  and i am getting the result. so let me know if i need to put this command in string and pass this string (example:my_blast_exe). Still i want to know how to pass the input file(my_blast_file).
> 
> i think i confuse myself
> let me know your view for this
> from
> manickam
> 
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-- 
Christof Winter
Bioinformatics Group
TU Dresden
Tatzberg 47-51
01307 Dresden, Germany