[BioPython] Qblast problem

Peter biopython at maubp.freeserve.co.uk
Thu Jan 19 05:12:50 EST 2006


Omenkeukwu, Gregory wrote:
> I am new to Biopython and I am experiencing a little problem. I am
> running the Blast over the internet example and I keep getting stuck
> when I invoke the qblast function in NCBIWWW.py. Has anyone ever
> dealt with the problem below? Every time I run this code I get
> Invalid literal error for int(). I will appreciate any response
> thanks.

Do you have an example XML blast output file that we could use to 
recreate the problem?

Ideally could log a bug for us, and then attach the XML file to the bug?

Peter



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