[BioPython] Parsing and Creating Dictionaries of GenBank files

Pepe Barbe elventear at gmail.com
Thu Apr 20 16:11:42 UTC 2006


On 4/20/06, Peter (BioPython) <biopython at maubp.freeserve.co.uk> wrote:
>
> The cookbook tutorial is a little misleading in that regard.  Indexing a
> GenBank file only makes sense for those files with multiple genbank
> record (i.e. multiple LOCUS lines).
<snip>
> Your example (and in my experience all Bacterial Genomes) have just a
> single very large record (which will contain many features).
>
> Does this page help?
>
> http://www2.warwick.ac.uk/fac/sci/moac/currentstudents/peter_cock/python/genbank/

It does help a lot. Thanks!

As an aside, while what I was doing, wasn't exactly what I was looking
for, I think it was crashing because of a Bug on 1.41. I installed the
latest CVS and it works normally now.

Pepe




More information about the Biopython mailing list