[BioPython] Bio.Nexus

[Frank Kauff]

Hi Chris,

unfortunately there's no documentation yet - my bad. But in short, to
read your data like

from Bio.Nexus import Nexus

nex=Nexus.Nexus('my_file.nex')

and then access data like

nex.taxlabels
nex.nchar
nex.charsets
nex.trees

etc.

I hope most of the methods have a descriptive title and are easy to use.
Let me know if I can help further. And I promise to write some
documentation, but it won't be before end of August.

Cheers,
Frank 



On Fri, 2005-07-15 at 17:16 +0100, cgw501 at york.ac.uk wrote:
> Hi everyone,
> 
> I am using the nexus format to store and process a bunch of mixed data and 
> want to use python to do it. I can't find the Bio.Nexus API documentation, 
> and I know this was a new development for 1.40b, but confusingly I can 
> import the module fine from the interpreter. Anyone have any ideas where I 
> might find some info/howto on the methods availible in this module without 
> going back to the source?
> 
> Thanks,
> 
> Chris Williams
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-- 
Frank Kauff
Dept. of Biology
Duke University
Box 90338
Durham, NC 27708
USA

Phone 919-660-7382
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