[BioPython] Installing Biopython

Emmanuel Talla talla at ibsm.cnrs-mrs.fr
Mon Feb 14 11:44:59 EST 2005


Thanks !!!!!

Python-devel was installed and egenix-mx-base  as well as Numeric tools 
23.4 were installed  correctly.

Thanks again for your help!!!!

Manu




A 14:44 14/02/2005 +0100, Frederic Sohm a écrit :
>Hi,
>
>You certainly do not have installed the python-devel package.
>Mandrake keep the python header files in this package.
>
>Try this before installing :
>
>$ urpmi python-devel
>
>This will install the header files needed for the compilation.
>Then you can start again the installation has you did before.
>
>Fred







>On Monday 14 February 2005 14:37, Emmanuel Talla wrote:
> > Dear all,
> >
> > I have tryed to install biopython and dependencies (Numeric and mxText
> > modules), following the installation instructions:
> >
> > ==================
> > 3.1.1 UNIX and Mac OS X systems
> > For UNIX and UNIX-like systems you should download the tar.gz file from the
> > page listed above. At the current time, this is
> > egenix-mx-base-2.0.4.tar.gz.
> >
> > Once you download this, unpack it and change into the created directory:
> > $ gunzip egenix-mx-base-2.0.4.tar.gz
> > $ tar -xvpf egenix-mx-base-2.0.4.tar
> > $ cd egenix-mx-base-2.0.4
> > To build it, use the standard python build procedure:
> > $ python setup.py build
> > Then become root, and install it, again using the standard python
> > mechanism: # python setup.py install
> > ====================
> >
> > In the "python setup.py build" step, il have this message:
> >
> > error: Invalid Python installation: Unable to open
> > /usr/lib/python2.3/config/Makefile (no such file or directory)
> >
> >
> >
> > That right, I checked myself and there is no such file related to python on
> > my disk.
> > OS is Mandrake 10.1.
> > Python 2.3 version (obtained from the Mandrake package)
> >
> >
> > Any help would be appreciated
> >
> > Manu
> > _______________________________________________
> > BioPython mailing list  -  BioPython at biopython.org
> > http://biopython.org/mailman/listinfo/biopython
>
>--
>Frédéric Sohm
>Equipe INRA U1126 "Morphogenèse du système nerveux des Chordés"
>UPR 2197 DEPSN, CNRS
>Institut de Neurosciences A. Fessard
>1 Avenue de la Terrasse
>91 198 GIF-SUR-YVETTE
>FRANCE
>Phone: +33 (0) 1 69 82 34 12
>Fax:+33 (0) 1 69 82 34 47




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