[BioPython] parsing NMR PDB

Thomas Hamelryck thamelry at binf.ku.dk
Tue Apr 5 10:49:12 EDT 2005


On Tuesday 05 April 2005 16:45, Edoardo Saccenti wrote:
> I'm parsing an NMR PDB file
> using the command
>
> parser = PDBparser(PERMISSIVE=1)  #or = 0
> structure = parser.get_structure(str_id, pdb_name)
>
> I get the warning:
> nonstandard resolution  NOT APPLICABLE.
>
> parser works fine but I can't avoid this warning.
>
> Any idea?

Everything is fine: NMR structures do not have a resolution.
I think you are using an old version of Biopython, right? The current
version does not generate this warning anymore.

Best regards,

-Thomas



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