[BioPython] Need help to get Fasta sequence of Gis !

[Iddo Friedberg]

Welcome!

Since the list is huge, I guess you should do it standalone, rather than 
via the net.

How about downloading nr or np as the case may be from NCBI. The gi 
numbers should be in the fasta headers. Then use the fasta parser (see 
tutorial) to parse through the file, and retrieve those sequences which 
you need.

email me if you need more info,

Iddo

Jonathan Boulais wrote:
> Hi everyone !
>  
> I'm a newbie to Biopython and I would like to get the fasta sequences of 
> a huge list of Gis. Any suggestions ?
>  
> Thanks !
> 
> ------------------------------------------------------------------------
> MSN Search, le moteur de recherche qui pense comme vous ! Cliquez-ici 
> <http://g.msn.com/8HMAFRCA/2752??PS=>
> 
> 
> ------------------------------------------------------------------------
> 
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-- 
Iddo Friedberg, Ph.D.
The Burnham Institute
10901 N. Torrey Pines Rd.
La Jolla, CA 92037
USA
Tel: +1 (858) 646 3100 x3516
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http://ffas.ljcrf.edu/~iddo