[BioPython] Zerg BLAST parser

Leighton Pritchard L.Pritchard at scri.sari.ac.uk
Tue Sep 2 09:25:44 EDT 2003


At 09:42 02/09/2003 +0200, Yves Bastide wrote:
>Leighton Pritchard wrote:
>>> > [...] the Zerg BLAST parser (http://bioinfo.iq.usp.br/zerg/) [...] only
>>> > had a wrapper for Perl, so I knocked one up for Python [...] at
>>> > http://bioinf.scri.sari.ac.uk/lp/pyzerg.shtml
>
>Thanks!
>
>A minor note (I don't know Pyrex): can Zerg constants, like QUERY_NAME, be 
>retained in pyzerg?

Yes, and I've added this, now. You have to address them as zerg.QUERY_NAME 
and so on, but it works.


Dr Leighton Pritchard AMRSC
PPI, Scottish Crop Research Institute
Invergowrie, Dundee, DD2 5DA, Scotland, UK
L.Pritchard at scri.sari.ac.uk
PGP key 47B4A485: http://www.keyserver.net http://pgp.mit.edu



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