[BioPython] GenBank feature proprotein

Peter Bienstman Peter.Bienstman at UGent.be
Tue Nov 18 15:37:12 EST 2003


On Tuesday 18 November 2003 20:49, Bertrand FROTTIER wrote:
> Hello everyone !
>
> I recently wrote a simple program to get sequences from GenBank.
> It's working fine for most of the sequences but failed for 5 of them
> (NM_001565, NM_001710, NM_006332, NM_000245 and NM_000212 if you're
> curious).
> After having a look at the records, I discovered that they all have in
> common a new *undocumented* feature: "proprotein".
> Fortunately, the fix is rather simple: simply add a key "proprotein" in
> Bio.GenBank.genbank_format feature_key_names, and everything is working
> fine !

The fix is in CVs now.

Thanks!

Peter

-- 
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Peter Bienstman
Ghent University, Dep. of Information Technology
Sint-Pietersnieuwstraat 41, B-9000 Gent, Belgium
tel: +32 9 264 34 45, fax: +32 9 264 35 93
WWW: http://photonics.intec.UGent.be
email: Peter.Bienstman at UGent.be
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